RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CLN6Q9NWW5 311 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 HMGXB4Q9UGU5 601 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ENOPH1Q9UHY7 261 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 C3orf18Q9UK00 162 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAB23Q9ULC3 237 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TBC1D24Q9ULP9 559 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PSMD13Q9UNM6 376 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RHBDD3Q9Y3P4 386 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CHTOPQ9Y3Y2 248 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 HES2Q9Y543 173 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 AKNAQ7Z591 1439 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MROH7Q68CQ1 1323 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UBN2Q6ZU65 1347 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PHLPP2Q6ZVD8 1323 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAD50Q92878 1312 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SBNO1A3KN83 1393 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PLEKHG2Q9H7P9 1386 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TNIKQ9UKE5 1360 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 KCNE1BA0A087WTH5 132 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IGKV1D-13A0A0B4J2D9 117 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 A0A1B0GW55 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PLAC8L1A1L4L8 177 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 GOLGA6L10A6NI86 522 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF878C9JN71 531 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PRAMEF26H0Y7S4 382 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 KPNA3O00505 521 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 BPY2O14599 106 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TRDMT1O14717 391 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 LIN7AO14910 233 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 XRCC2O43543 280 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CD5LO43866 347 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 EIF4E2O60573 245 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 MPDU1O75352 247 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 GATBO75879 557 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SCELO95171 688 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 FARS2O95363 451 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 LYPLA2O95372 231 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DEXIO95424 95 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ETHE1O95571 254 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TSPAN13O95857 204 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 OTCP00480 354 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 APOEP02649 317 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IFNW1P05000 195 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IL4P05112 153 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 BCHEP06276 602 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RHOCP08134 193 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RPS17P08708 135 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CLTAP09496 248 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CT62P0C5K7 136 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 OR56A5P0C7T3 313 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4L2P0CJ85 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4L3P0CJ86 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4L5P0CJ88 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4L6P0CJ89 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4L7P0CJ90 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IGKV1-13P0DP09 117 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 HSPD1P10809 573 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PRPS2P11908 318 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 NQO2P16083 231 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IL1RNP18510 177 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PGAM1P18669 254 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TCN2P20062 427 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RAB4AP20338 218 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RAB5AP20339 215 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 BCKDHBP21953 392 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TUBG1P23258 451 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 F8A1P23610 371 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 G0S2P27469 103 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 HTR1DP28221 377 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 LCN1P31025 176 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PFN2P35080 140 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SSTR5P35346 364 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC11A1P49279 550 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TUFMP49411 452 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SULT1A2P50226 295 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 UBE2G2P60604 165 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ATP6V0D1P61421 351 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 VSNL1P62760 191 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RPL10AP62906 217 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 REEP5Q00765 189 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IFITM3Q01628 133 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DR1Q01658 176 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC25A11Q02978 314 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 MXD1Q05195 221 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SELENBP1Q13228 472 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ILKQ13418 452 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC39A6Q13433 755 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DGCR6Q14129 220 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TFDP2Q14188 446 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 GNA13Q14344 377 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CASP8Q14790 479 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PON3Q15166 354 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TMED2Q15363 201 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 POU2AF1Q16633 256 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 EXOC3L4Q17RC7 722 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RSPO1Q2MKA7 263 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 NDUFAF6Q330K2 333 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CLVS2Q5SYC1 327 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 AVPI1Q5T686 147 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms