RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 S100A9P06702 114 aaKnown RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 KLK1P06870 262 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 FGF4P08620 206 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 IL3P08700 152 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 GIG44P09565 113 aaPredicted RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 DNAH10OSP0CZ25 163 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 BCKDHAP12694 445 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 GCKP35557 465 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 MAGEA5P43359 124 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 DIO3P55073 304 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NDPQ00604 133 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 ZNF763Q0D2J5 394 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 STX4Q12846 297 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 ZNF154Q13106 437 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SPCS2Q15005 226 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NSDHLQ15738 373 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 IMPG1Q17R60 797 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 Q3ZCU0 254 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NADK2Q4G0N4 442 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SPIN4Q56A73 249 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 XKR7Q5GH72 579 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SLC48A1Q6P1K1 146 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 TMEM53Q6P2H8 277 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 TFAP2EQ6VUC0 442 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 DGAT2L6Q6ZPD8 337 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 RGS9BPQ6ZS82 235 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 PAGE2Q7Z2X7 111 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 CRLF3Q8IUI8 442 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 GCNT2Q8N0V5 402 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 KIF2BQ8N4N8 673 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 ZNF321PQ8N8H1 164 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 APCDD1LQ8NCL9 501 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 B3GNT7Q8NFL0 401 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 OR2T33Q8NG76 320 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 OR56B2PQ8NGI1 322 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 LILRB4Q8NHJ6 448 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 CDC26Q8NHZ8 85 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 SLC22A8Q8TCC7 542 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 C16orf78Q8WTQ4 265 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 PSMF1Q92530 271 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 TM4SF18Q96CE8 201 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 TUBGCP3Q96CW5 907 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 C19orf60Q96EN9 201 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 TMEM80Q96HE8 168 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 AKR1E2Q96JD6 320 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 FCRL1Q96LA6 429 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NPAS2Q99743 824 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 RPF2Q9H7B2 306 aaKnown RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 LRTM1Q9HBL6 345 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 EML4Q9HC35 981 aaKnown RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 ADAP2Q9NPF8 381 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 BATF3Q9NR55 127 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NMRK1Q9NWW6 199 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 MS4A12Q9NXJ0 267 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 NKIRAS1Q9NYS0 192 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 VPS29Q9UBQ0 182 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 ZNF223Q9UK11 482 aaPredicted RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 ZNF256Q9Y2P7 627 aaPredicted RBP2.8□□□□□ -1.96
CD44-219ENST00000525685 DNAJC15Q9Y5T4 150 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 CROCCQ5TZA2 2017 aa2.8□□□□□ -1.96
CD44-219ENST00000525685 UNC79Q9P2D8 2635 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 APC2O95996 2303 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 TRBV11-1A0A0K0K1C0 115 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 A0A0U1RQV5 110 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 GNG14A0A1W2PPG7 69 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 RNF222A6NCQ9 220 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 FAM220BPB1ANY3 271 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 FCN1O00602 326 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 SDHDO14521 159 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 MAGEB3O15480 346 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 DPM1O60762 260 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 PEX11AO75192 247 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 GPR75O95800 540 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 F10P00742 488 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 IGKV3-11P04433 115 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 IFNA16P05015 189 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 CD55P08174 381 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 CT62P0C5K7 136 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 LINC00032P0C843 101 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 CALCBP10092 127 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 NT5EP21589 574 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 VDAC1P21796 283 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 CALB2P22676 271 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 S100A1P23297 94 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 IL32P24001 234 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 RPL14P50914 215 aaKnown RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 VLDLRP98155 873 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 KLRB1Q12918 225 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 STX3Q13277 289 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 SCGB2A2Q13296 93 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ZNF79Q15937 498 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 FAM71E1Q6IPT2 247 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ANKRD26P1Q6NSI1 321 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 NOXRED1Q6NXP6 359 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ZCCHC12Q6PEW1 402 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 IGFL2Q6UWQ7 119 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 IGFL3Q6UXB1 125 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 C16orf47Q6ZP98 133 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms