RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TNK1Q13470 666 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 BEX5Q5H9J7 111 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 MBNL2Q5VZF2 373 aaKnown RBP11.23□□□□□ -0.61
CPNE3-205ENST00000522240 TMEM42Q69YG0 159 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 ASPHD2Q6ICH7 369 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 ALKBH2Q6NS38 261 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 FTMTQ8N4E7 242 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 NKAIN3Q8N8D7 197 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 OR5D14Q8NGL3 314 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 SLC25A40Q8TBP6 338 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 SLC25A46Q96AG3 418 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
CPNE3-205ENST00000522240 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 ESRP2Q9H6T0 727 aaKnown RBP11.23□□□□□ -0.61
CPNE3-205ENST00000522240 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 TAS2R4Q9NYW5 299 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 PIGLQ9Y2B2 252 aa11.23□□□□□ -0.61
CPNE3-205ENST00000522240 MEGF11A6BM72 1044 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 DPRXA6NFQ7 191 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 WIPF3A6NGB9 483 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 ANKRD61A6NGH8 418 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 GGT3PA6NGU5 568 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 ATP6V1G2-DDX39BF2Z307 99 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 SULT1B1O43704 296 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 TMEM127O75204 238 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 FAHP16930 419 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 ZNF182P17025 639 aaPredicted RBP11.22□□□□□ -0.61
CPNE3-205ENST00000522240 IGFBP2P18065 325 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 RAB3BP20337 219 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 SOX6P35712 828 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 GLRXP35754 106 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 PSMD7P51665 324 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 RELBQ01201 579 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 SPOCK1Q08629 439 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 CROCCP3Q8IVE0 287 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
CPNE3-205ENST00000522240 OR56B2PQ8NGI1 322 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 UBASH3BQ8TF42 649 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 PIGTQ969N2 578 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 RADILQ96JH8 1075 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 TECTBQ96PL2 329 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 DCUN1D5Q9BTE7 237 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 OR2J1Q9GZK6 312 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 ZCCHC4Q9H5U6 513 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 NEK6Q9HC98 313 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 KCNN3Q9UGI6 736 aa11.22□□□□□ -0.61
CPNE3-205ENST00000522240 KLF2Q9Y5W3 355 aaPredicted RBP11.22□□□□□ -0.61
CPNE3-205ENST00000522240 DOPEY1Q5JWR5 2465 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 RTTNQ86VV8 2226 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 A0A0G2JK05 382 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ANXA2P2A6NMY6 339 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CD300LBA8K4G0 201 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 NOTOA8MTQ0 251 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 IQCF6A8MYZ5 107 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ABCD4O14678 606 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CST4P01036 141 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ERCC1P07992 297 aaPredicted RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CLEC2LP0C7M8 214 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ZNF16P17020 682 aaPredicted RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 RAB3AP20336 220 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 KITLGP21583 273 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CFPP27918 469 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 RPS19P39019 145 aaKnown RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 RORCP51449 518 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ERVS71-1P61550 626 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 HLXQ14774 488 aaPredicted RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CNN3Q15417 329 aaKnown RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 DGUOKQ16854 277 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ZNF718Q3SXZ3 478 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CEP78Q5JTW2 689 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 CLVS2Q5SYC1 327 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 RGS7BPQ6MZT1 257 aaPredicted RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 OR1M1Q8NGA1 313 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 OR13C9Q8NGT0 318 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 LINC01560Q8TB33 94 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
CPNE3-205ENST00000522240 SPSB1Q96BD6 273 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 HAVCR1Q96D42 359 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 ABCB9Q9NP78 766 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 TMEM138Q9NPI0 162 aa11.21□□□□□ -0.61
CPNE3-205ENST00000522240 PRR14LQ5THK1 2151 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.2□□□□□ -0.62
CPNE3-205ENST00000522240 GOSR1O95249 250 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 ALDOBP05062 364 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 PRF1P14222 555 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 ZNF250P15622 560 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 ADRA2CP18825 462 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 BDKRB2P30411 391 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 GCH1P30793 250 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 MXD1Q05195 221 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 HNRNPA0Q13151 305 aaKnown RBP11.2□□□□□ -0.62
CPNE3-205ENST00000522240 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 NR2C2APQ86WQ0 139 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms