RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 OR8G5Q8NG78 346 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 OR14K1Q8NGZ2 314 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 TECTBQ96PL2 329 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 NEK6Q9HC98 313 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 ZNF275Q9NSD4 429 aaPredicted RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 TRBV5-5A0A0J9YX44 114 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 ANXA2P2A6NMY6 339 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 H3BSH0 61 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 ERCC1P07992 297 aaPredicted RBP12.09□□□□□ -0.47
SDC2-203ENST00000519587 CD36P16671 472 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 GALP22466 123 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 TNFSF4P23510 183 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 ACKR3P25106 362 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 SOX2P48431 317 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 PRSS12P56730 875 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 RPS25P62851 125 aaKnown RBP12.09□□□□□ -0.47
SDC2-203ENST00000519587 MZT1Q08AG7 82 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 SSX1Q16384 188 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 MSMPQ1L6U9 139 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 CLVS2Q5SYC1 327 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 GPR141Q7Z602 305 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 DTX2Q86UW9 622 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 LRP11Q86VZ4 500 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 OR51A4Q8NGJ6 313 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 OR13G1Q8NGZ3 307 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 OR10AC1Q8NH08 325 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 PIGTQ969N2 578 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 TMEM203Q969S6 136 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 TMEM106AQ96A25 262 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 ADAT1Q9BUB4 502 aaKnown RBP12.09□□□□□ -0.47
SDC2-203ENST00000519587 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 STUB1Q9UNE7 303 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 PMF1-BGLAPU3KQ54 211 aa12.09□□□□□ -0.47
SDC2-203ENST00000519587 DSCAMO60469 2012 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 CST4P01036 141 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 RAF1P04049 648 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 OCMP0CE72 109 aaPredicted RBP12.08□□□□□ -0.48
SDC2-203ENST00000519587 ALDH3B2P48448 385 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 PPOXP50336 477 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 ZNF81P51508 661 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 PPP3R1P63098 170 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 OR8G1Q15617 311 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 SERPINA12Q8IW75 414 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 OR5D14Q8NGL3 314 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 OR13F1Q8NGS4 319 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 OR13C5Q8NGS8 318 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 FGGYQ96C11 551 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 HIST1H2AAQ96QV6 131 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 OR14A2Q96R54 314 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 SLC30A2Q9BRI3 323 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 CHST5Q9GZS9 411 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 MS4A5Q9H3V2 200 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 PLEKHF2Q9H8W4 249 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 TMEM100Q9NV29 134 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 NKIRAS2Q9NYR9 191 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
SDC2-203ENST00000519587 SSR3Q9UNL2 185 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 F8P00451 2351 aa12.08□□□□□ -0.48
SDC2-203ENST00000519587 GMDSO60547 372 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 NRASP01111 189 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 TFAP2AP05549 437 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 DANCRP0C864 163 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 FSTP19883 344 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 CA6P23280 308 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 ALDH3B1P43353 468 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 RPS11P62280 158 aaKnown RBP eCLIP12.07□□□□□ -0.48
SDC2-203ENST00000519587 PRDX4Q13162 271 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 TNK1Q13470 666 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 CNN3Q15417 329 aaKnown RBP12.07□□□□□ -0.48
SDC2-203ENST00000519587 PCGF3Q3KNV8 242 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 KRTAP21-3Q3LHN1 58 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 ACSM3Q53FZ2 586 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 ARFGEF3Q5TH69 2177 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 PLCXD3Q63HM9 321 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 UTS2BQ765I0 119 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 CEACAM19Q7Z692 300 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 PARP16Q8N5Y8 322 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 SPERTQ8NA61 448 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 OR8S1Q8NH09 359 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 PIGCQ92535 297 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
SDC2-203ENST00000519587 DERL3Q96Q80 235 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 MICU1Q9BPX6 476 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 SOX7Q9BT81 388 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
SDC2-203ENST00000519587 SLITRK2Q9H156 845 aa12.07□□□□□ -0.48
SDC2-203ENST00000519587 EXOSC4Q9NPD3 245 aaKnown RBP12.07□□□□□ -0.48
SDC2-203ENST00000519587 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
SDC2-203ENST00000519587 RHBDD3Q9Y3P4 386 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms