RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 ERI3O43414 337 aaKnown RBP1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 CHMP2AO43633 222 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 RPS15P62841 145 aaKnown RBP1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 ITIH4Q14624 930 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZNF678Q5SXM1 525 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 CCDC183Q5T5S1 534 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 SMARCD3Q6STE5 483 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 BBS7Q8IWZ6 715 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 BPIFCQ8NFQ6 507 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 RAB1CQ92928 201 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZBED3Q96IU2 234 aaPredicted RBP1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 CCDC77Q9BR77 488 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 GEMIN7Q9H840 131 aaKnown RBP1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 LYARQ9NX58 379 aaKnown RBP1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 GCNT4Q9P109 453 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 HES2Q9Y543 173 aa1.33□□□□□ -2.2
CDC42SE2-210ENST00000506929 ARPC4-TTLL3A0A0A6YYG9 625 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 SDHAF1A6NFY7 115 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZNF878C9JN71 531 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 BCKDKO14874 412 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 CDH16O75309 829 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 TDP2O95551 362 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 IFNW1P05000 195 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 ERCC1P07992 297 aaPredicted RBP1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 EIF2S2P20042 333 aaKnown RBP1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 OTX1P32242 354 aaPredicted RBP1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 RGS8P57771 180 aaPredicted RBP1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 IRF8Q02556 426 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 PYDC2Q56P42 97 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 SCD5Q86SK9 330 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 VKORC1L1Q8N0U8 176 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 ORMDL3Q8N138 153 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 PQLC3Q8N755 202 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 SLC25A29Q8N8R3 303 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 FAM81AQ8TBF8 368 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 TMEM159Q96B96 161 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 FXYD5Q96DB9 178 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 FAM192AQ9GZU8 254 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 TOLLIPQ9H0E2 274 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 DSN1Q9H410 356 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 PIGUQ9H490 435 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 TRIM45Q9H8W5 580 aaPredicted RBP1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 SND1-IT1Q9HBX3 110 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 CCNB1IP1Q9NPC3 277 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 TMEM100Q9NV29 134 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 IL37Q9NZH6 218 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 CRCT1Q9UGL9 99 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZNF257Q9Y2Q1 563 aa1.32□□□□□ -2.2
CDC42SE2-210ENST00000506929 KBTBD11-OT1A0A1B0GTJ5 212 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 J3QRE1 110 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 CCDC22O60826 627 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 FCN3O75636 299 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 THRAP10827 490 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 MYL9P24844 172 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 IL3RAP26951 378 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 APLNRP35414 380 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR1G1P47890 313 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 TGM4P49221 684 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 IFITM3Q01628 133 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZNF33AQ06730 810 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 BTN1A1Q13410 526 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 NAB1Q13506 487 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 RAB43Q86YS6 212 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 GABRG1Q8N1C3 465 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 UBAC2Q8NBM4 344 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR4C13Q8NGP0 309 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR52N1Q8NH53 320 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 MUC7Q8TAX7 377 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 ENKURQ8TC29 256 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 RXFP2Q8WXD0 754 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 FAM19A4Q96LR4 140 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 PKMYT1Q99640 499 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 BPIFA3Q9BQP9 254 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 VSIRQ9H7M9 311 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZNF302Q9NR11 478 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 CLN8Q9UBY8 286 aa1.31□□□□□ -2.2
CDC42SE2-210ENST00000506929 ZNF608Q9ULD9 1512 aaPredicted RBP1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 ISPDA4D126 451 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 CTNSO60931 367 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 WBP4O75554 376 aaKnown RBP1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 KRT16P08779 473 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 TGFBR2P37173 567 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 BEX3Q00994 111 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 MERTKQ12866 999 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR1Q1Q15612 314 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 LIN9Q5TKA1 542 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR2T5Q6IEZ7 315 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 TMEM53Q6P2H8 277 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 CCDC148Q8NFR7 591 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR4C5Q8NGB2 326 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR4M2Q8NGB6 313 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 OR2T29Q8NH02 315 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 RBPMSQ93062 196 aaKnown RBP1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 UBE2E2Q96LR5 201 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 CHP1Q99653 195 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 C1orf50Q9BV19 199 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 NMRK1Q9NWW6 199 aa1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 YARS2Q9Y2Z4 477 aaKnown RBP1.3□□□□□ -2.2
CDC42SE2-210ENST00000506929 SETD1AO15047 1707 aaKnown RBP1.29□□□□□ -2.2
CDC42SE2-210ENST00000506929 KCNE1BA0A087WTH5 132 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms