RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SMURF2Q9HAU4 748 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 TMEM100Q9NV29 134 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 RHCGQ9UBD6 479 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 ZNF391Q9UJN7 358 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 PRPF19Q9UMS4 504 aaKnown RBP2.91□□□□□ -1.94
USP46-205ENST00000504078 AURKCQ9UQB9 309 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 COA3Q9Y2R0 106 aaPredicted RBP2.91□□□□□ -1.94
USP46-205ENST00000504078 NDUFAF1Q9Y375 327 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 RAP2CQ9Y3L5 183 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 LHFPL6Q9Y693 200 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 DNAH7Q8WXX0 4024 aa2.91□□□□□ -1.94
USP46-205ENST00000504078 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
USP46-205ENST00000504078 FAM172BPA6NC97 362 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 GMNCA6NCL1 334 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 PRORSD1PA6NEY8 169 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 GGT3PA6NGU5 568 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 CD300LBA8K4G0 201 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 H0YAE9 185 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 J3KTA2 159 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 F2RL2O00254 374 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 NDUFB3O43676 98 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 TYROBPO43914 113 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 SLC16A7O60669 478 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 CLIC3O95833 236 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 MT-ND1P03886 318 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 LCATP04180 440 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 LPLP06858 475 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 SNRNP70P08621 437 aaKnown RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 ACSM4P0C7M7 580 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ZCCHC18P0CG32 403 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 COX5BP10606 129 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 IDO1P14902 403 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 GGT2P36268 569 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ECI1P42126 302 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 GUCA1AP43080 201 aaPredicted RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 GABRA2P47869 451 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 UBE2E1P51965 193 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 CAPZA1P52907 286 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 CRYBA2P53672 197 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 DGCR2P98153 550 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 IL5RAQ01344 420 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ZNF92Q03936 586 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 EMX1Q04741 257 aaPredicted RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 IFFO1Q0D2I5 559 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 TRAP1Q12931 704 aaKnown RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 FADDQ13158 208 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ZNF273Q14593 569 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 KCNJ8Q15842 424 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 C9orf152Q5JTZ5 239 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 LDLRAD2Q5SZI1 272 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 NCR3LG1Q68D85 454 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 STUMQ69YW2 141 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 C11orf88Q6PI97 169 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 COLCA1Q6ZS62 124 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 PGAP1Q75T13 922 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ZNF329Q86UD4 541 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 IFT20Q8IY31 132 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 LRRC75AQ8NAA5 344 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 PAPD5Q8NDF8 572 aaKnown RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 LY6G5BQ8NDX9 201 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 KLHL30-AS1Q8NEE0 82 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 OR4M1Q8NGD0 313 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 OR8S1Q8NH09 359 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 PIFOQ8TCI5 191 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 SLC26A7Q8TE54 656 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 TMEM239Q8WW34 195 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ACOT11Q8WXI4 607 aaPredicted RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 RPL3LQ92901 407 aaKnown RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 PTP4A1Q93096 173 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 APOBEC3DQ96AK3 386 aaPredicted RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 DUS3LQ96G46 650 aaKnown RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 CLUHP3Q96NS8 147 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 RBP7Q96R05 134 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ZNF426Q9BUY5 554 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 MYLK2Q9H1R3 596 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 ABCB10Q9NRK6 738 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 C19orf12Q9NSK7 152 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 SLC25A10Q9UBX3 287 aaPredicted RBP2.9□□□□□ -1.95
USP46-205ENST00000504078 TCF19Q9Y242 345 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 MED31Q9Y3C7 131 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 HERC2O95714 4834 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 CSMD3Q7Z407 3707 aa2.9□□□□□ -1.95
USP46-205ENST00000504078 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 TRBV5-3A0A0A0MS03 114 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 A6NDX4 124 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 CENPBD1B2RD01 187 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 M0QX08 132 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 M0R135 149 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 DCTN6O00399 190 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 XKRYO14609 159 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 CDC42EP2O14613 210 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 TBX1O43435 398 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 AKR7A2O43488 359 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 SERPINB7O75635 380 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 OR5F1O95221 314 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 IGF2P01344 180 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 IFNW1P05000 195 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 ARG1P05089 322 aa2.89□□□□□ -1.95
USP46-205ENST00000504078 NR2C1P13056 603 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms