RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR1M1Q8NGA1 313 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 DACT3Q96B18 629 aaPredicted RBP9.94□□□□□ -0.82
MED28-203ENST00000503945 NRBF2Q96F24 287 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 HIST1H2AAQ96QV6 131 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 MICU1Q9BPX6 476 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 PCGF1Q9BSM1 259 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 NIPAL2Q9H841 368 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 RHBDD3Q9Y3P4 386 aa9.94□□□□□ -0.82
MED28-203ENST00000503945 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 DNAJC9-AS1A6NH13 148 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 ZNF879B4DU55 563 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 P2RY10O00398 339 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 TMPRSS2O15393 492 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 FKBP6O75344 327 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 PLATP00750 562 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 ANOS1P23352 680 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 SLC9A3R2Q15599 337 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 SNAPC1Q16533 368 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 METTL11BQ5VVY1 283 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 C16orf87Q6PH81 154 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 KCTD18Q6PI47 426 aaPredicted RBP9.93□□□□□ -0.82
MED28-203ENST00000503945 KRT77Q7Z794 578 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 GCSAMQ8N6F7 178 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 PAPD5Q8NDF8 572 aaKnown RBP9.93□□□□□ -0.82
MED28-203ENST00000503945 LRRC29Q8WV35 223 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
MED28-203ENST00000503945 AMELYQ99218 206 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 TEAD3Q99594 435 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 ZNF747Q9BV97 191 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 PAPOLGQ9BWT3 736 aaKnown RBP9.93□□□□□ -0.82
MED28-203ENST00000503945 CNTD2Q9H8S5 307 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 TVP23BQ9NYZ1 205 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 H2AFY2Q9P0M6 372 aaPredicted RBP9.93□□□□□ -0.82
MED28-203ENST00000503945 ZNF319Q9P2F9 582 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 ZNF391Q9UJN7 358 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 LAMP5Q9UJQ1 280 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 POMPQ9Y244 141 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 MPC1Q9Y5U8 109 aa9.93□□□□□ -0.82
MED28-203ENST00000503945 IGHV3OR15-7A0A075B7D8 119 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 TRAV40A0A0B4J280 105 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 TCRBV3S1A0A5B6 114 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 ACOD1A6NK06 481 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 C22orf46C9J442 243 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 DVL1O14640 695 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 CDIPTO14735 213 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 GSC2O15499 205 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 SELENOFO60613 162 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 RNASE1P07998 156 aaKnown RBP9.92□□□□□ -0.82
MED28-203ENST00000503945 ALOX5APP20292 161 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 CFHR2P36980 270 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 CRISP1P54107 249 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 ARF6P62330 175 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 HOXA4Q00056 320 aaPredicted RBP9.92□□□□□ -0.82
MED28-203ENST00000503945 TEX36Q5VZQ5 186 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 TMEM236Q5W0B7 351 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 BTN2A1Q7KYR7 527 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 SLC36A1Q7Z2H8 476 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 FAM90A1Q86YD7 464 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 HS3ST5Q8IZT8 346 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 DNAJC9Q8WXX5 260 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 PIGCQ92535 297 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 ITFG2Q969R8 447 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 RNF170Q96K19 258 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 RTL8AQ9BWD3 113 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 MROQ9BYG7 248 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 YIPF3Q9GZM5 350 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 ZNF696Q9H7X3 374 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 ABCB9Q9NP78 766 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 NOX4Q9NPH5 578 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 PAPOLBQ9NRJ5 636 aaKnown RBP9.92□□□□□ -0.82
MED28-203ENST00000503945 KAAG1Q9UBP8 84 aa9.92□□□□□ -0.82
MED28-203ENST00000503945 SOX21Q9Y651 276 aaPredicted RBP9.92□□□□□ -0.82
MED28-203ENST00000503945 hCG_38984A0A1B0GV85 526 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 TMEM269A0A1B0GVZ9 245 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 POM121CA8CG34 1229 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 ZNF850A8MQ14 1090 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 GPR37O15354 613 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 NDUFB3O43676 98 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 CST4P01036 141 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 CRYBA1P05813 215 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 MAP2K3P46734 347 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 RASSF2P50749 326 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 HCCSP53701 268 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 ACTR3P61158 418 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 IL13RA1P78552 427 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 APOFQ13790 326 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 PDCD1Q15116 288 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 DEGS2Q6QHC5 323 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 SHISA2Q6UWI4 295 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 WDR82Q6UXN9 313 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 KCTD8Q6ZWB6 473 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 GATAD2BQ8WXI9 593 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 OR5P3Q8WZ94 311 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 ST8SIA4Q92187 359 aa9.91□□□□□ -0.82
MED28-203ENST00000503945 C12orf43Q96C57 262 aaKnown RBP9.91□□□□□ -0.82
MED28-203ENST00000503945 SLC7A6OSQ96CW6 309 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms