RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SNRPNP63162 240 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SHBQ15464 509 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SURF2Q15527 256 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 CLLU1Q5K131 121 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 S100A7AQ86SG5 101 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PRSS35Q8N3Z0 413 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR5H2Q8NGV7 314 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 IMMP1LQ96LU5 166 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PRO3102Q9H379 93 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 LDAHQ9H6V9 325 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 FAM86C1Q9NVL1 165 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 IL17BQ9UHF5 180 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 LOXL2Q9Y4K0 774 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 TMEM272A0A1B0GTI8 110 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PGA4P0DJD7 388 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PGA3P0DJD8 388 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PPP3CBP16298 524 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 MST1P26927 711 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 RELQ04864 619 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 BAMBIQ13145 260 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF674Q2M3X9 581 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR5M10Q6IEU7 315 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 LINC00346Q8IVM7 164 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 NAXDQ8IW45 347 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 ARMC10Q8N2F6 343 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR10R2Q8NGX6 335 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 ZPLD1Q8TCW7 415 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SLC25A38Q96DW6 304 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 FBXO17Q96EF6 278 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 RBM24Q9BX46 236 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 MRPL13Q9BYD1 178 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SLC2A8Q9NY64 477 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PLEK2Q9NYT0 353 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 KLF13Q9Y2Y9 288 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 NPTNQ9Y639 398 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 A0A0B4J2A0 478 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SPP1P10451 314 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 CD37P11049 281 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SRP9P49458 86 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SPOCK1Q08629 439 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SCGB2B2Q4G0G5 96 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 Q6ZTK2 550 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 LHFPL2Q6ZUX7 228 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 BEST3Q8N1M1 668 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR5L1Q8NGL2 311 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR2V1Q8NHB1 315 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 EDEM2Q9BV94 578 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SHPKQ9UHJ6 478 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SMCO3A2RU48 225 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 MFSD2BA6NFX1 497 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 TRAPPC6AO75865 159 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF705DP0CH99 300 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF705BP0CI00 300 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 TCN2P20062 427 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 OTX2P32243 289 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 RPS27AP62979 156 aaKnown RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 UBA52P62987 128 aaKnown RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 CXADRP78310 365 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 PRAMEF17Q5VTA0 474 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 C1QL3Q5VWW1 255 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 GSG1LQ6UXU4 331 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 DNM1P46Q6ZS02 220 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 SSX7Q7RTT5 188 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 PRSS45Q7RTY3 260 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 ANGPTL5Q86XS5 388 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 UBAC2Q8NBM4 344 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 MARVELD3Q96A59 401 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 SYT3Q9BQG1 590 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 KIF25Q9UIL4 384 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 KLHDC2Q9Y2U9 406 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 ATG2AQ2TAZ0 1938 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 TRIM77I1YAP6 450 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 K7EPK0 472 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 MAGEB4O15481 346 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 DHRS3O75911 302 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 STK17BO94768 372 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 OR2F2O95006 317 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 RRASP10301 218 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 CD46P15529 392 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 PRKXP51817 358 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 CLDN12P56749 244 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 OR2F1Q13607 317 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 CHRFAM7AQ494W8 412 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 FAM27BQ5VT28 67 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 SEZ6L2Q6UXD5 910 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 FAM71E2Q8N5Q1 922 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 OR9K2Q8NGE7 335 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 TMEM54Q969K7 222 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 CNTNAP3BQ96NU0 1288 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 G6PC2Q9NQR9 355 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 MED29Q9NX70 200 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 RBM7Q9Y580 266 aaKnown RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 SNRNP200O75643 2136 aaKnown RBP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 DCTN6O00399 190 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 SIGLEC5O15389 551 aa6.57□□□□□ -1.36
PDGFC-203ENST00000502773 EIF3GO75821 320 aaKnown RBP eCLIP6.57□□□□□ -1.36
PDGFC-203ENST00000502773 FCGR2AP12318 317 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms