RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF596Q8TC21 504 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 LRRC20Q8TCA0 184 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 LGALS14Q8TCE9 139 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 C2orf15Q8WU43 125 aaKnown RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 FAM222BQ8WU58 562 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 CT55Q8WUE5 264 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 RPEQ96AT9 228 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF317Q96PQ6 595 aaPredicted RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 HIST1H4GQ99525 98 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC29A1Q99808 456 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 SYT15Q9BQS2 421 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 MRPL45Q9BRJ2 306 aaKnown RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 AGMATQ9BSE5 352 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 BBS2Q9BXC9 721 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMEM59Q9BXS4 323 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 GBA3Q9H227 469 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 TCEAL2Q9H3H9 227 aaPredicted RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 JPT2Q9H910 190 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 EXD2Q9NVH0 621 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 HRASLS2Q9NWW9 162 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 THUMPD1Q9NXG2 353 aaKnown RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHMP5Q9NZZ3 219 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF581Q9P0T4 197 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 LSM7Q9UK45 103 aaKnown RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 RCL1Q9Y2P8 373 aaKnown RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 RBMX2Q9Y388 322 aaKnown RBP1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 PPIL1Q9Y3C6 166 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 FADS3Q9Y5Q0 445 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 MYCBP2O75592 4640 aa1.86□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRAV9-2A0A087WT02 112 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 A0A0A6YYD5 115 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRAV39A0A0B4J263 110 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 A0A0G2JRQ6 117 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 A0A1B0GTI1 187 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 A0A1B0GU03 582 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMEM150BA6NC51 233 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 RPL37AP8A6NKH3 93 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 LYRM9A8MSI8 78 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 A8MUA0 341 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 DYNC1I1O14576 645 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 GOSR2O14653 212 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC31A1O15431 190 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 XRCC2O43543 280 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 EDIL3O43854 480 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 MGRN1O60291 552 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 EIF3GO75821 320 aaKnown RBP eCLIP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CCNB2O95067 398 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGHV3-48P01763 117 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 HBE1P02100 147 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ANXA5P08758 320 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 PNMA6AP0CW24 399 aaPredicted RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 THRAP10827 490 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 NR2C1P13056 603 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ABOP16442 354 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 FASP25445 335 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 PSMB6P28072 239 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 GPX4P36969 197 aaPredicted RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CRATP43155 626 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CCR8P51685 355 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ATP5J2P56134 94 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ERVK11-1P61568 191 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 RPL36AP83881 106 aaKnown RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SMARCB1Q12824 385 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 UNC119Q13432 240 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CST6Q15828 149 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 C5orf64Q2M2E5 130 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 UBE2UQ5VVX9 321 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 GPR107Q5VW38 600 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC22A10Q63ZE4 541 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 C1orf94Q6P1W5 598 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGFL2Q6UWQ7 119 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 WDR82Q6UXN9 313 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 UNQ9370/PRO34162Q6UXP9 181 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ALKAL1Q6UXT8 129 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 DNM1P46Q6ZS02 220 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 NDUFAF7Q7L592 441 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ABHD12BQ7Z5M8 362 aaPredicted RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CMC1Q7Z7K0 106 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 PLA2G4DQ86XP0 818 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF100Q8IYN0 542 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 C6orf223Q8N319 242 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR7G1Q8NGA0 311 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR51S1Q8NGJ8 323 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SPPL2BQ8TCT7 592 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CAPSLQ8WWF8 208 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 FAM131CQ96AQ9 280 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 FGGYQ96C11 551 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 RAB3CQ96E17 227 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SEH1LQ96EE3 360 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 POM121L2Q96KW2 1035 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SIGLEC12Q96PQ1 595 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 DUX3Q96PT4 197 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 OPRPNQ99935 248 aaPredicted RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SH3GL3Q99963 347 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 LRRC61Q9BV99 259 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHID1Q9BWS9 393 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 DGCR6LQ9BY27 220 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ULBP3Q9BZM4 244 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 DEFB127Q9H1M4 99 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SYT4Q9H2B2 425 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms