RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PDZD2O15018 2839 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 ARFGEF3Q5TH69 2177 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 TRBV2A0A0J9YWF9 115 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 A0A1B0GTI1 187 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 LOC107986453A0A1B0GWG9 222 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 CST4P01036 141 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 HPXP02790 462 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 HLA-DPB1P04440 258 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 ISG15P05161 165 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 ACKR3P25106 362 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 KIR3DL2P43630 455 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 NANOS3P60323 173 aaKnown RBP14.53□□□□□ -0.08
HDAC6-235ENST00000495515 CARTPTQ16568 116 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 PRSS48Q7RTY5 328 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 CELF2-AS1Q8N7Q2 184 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 NANOGP1Q8N7R0 232 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 GATAD2BQ8WXI9 593 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 RNF166Q96A37 237 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-235ENST00000495515 HIST1H2AAQ96QV6 131 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 C14orf119Q9NWQ9 140 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 PAK1IP1Q9NWT1 392 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-235ENST00000495515 ERVK-18Q9QC07 812 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 HHLA2Q9UM44 414 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 PIGLQ9Y2B2 252 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 RHBDD3Q9Y3P4 386 aa14.53□□□□□ -0.08
HDAC6-235ENST00000495515 IGHV1-69-2A0A0G2JMI3 117 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 OR4C45A6NMZ5 311 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 E9PI62 339 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 NDUFS8O00217 210 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 MLNRO43193 412 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 MRPS14O60783 128 aaKnown RBP14.52□□□□□ -0.09
HDAC6-235ENST00000495515 NCR1O76036 304 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 LY6HO94772 140 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 ACHEP22303 614 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 CRYBB2P43320 205 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 CDH15P55291 814 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 GABARAPL2P60520 117 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 TNK1Q13470 666 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 HFEQ30201 348 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 Q6ZSR3 168 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF525Q8N782 197 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 OR14K1Q8NGZ2 314 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 OR5AK2Q8NH90 309 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 PIGCQ92535 297 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 FAM168AQ92567 244 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 C10orf35Q96D05 121 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 MEGF10Q96KG7 1140 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 OR2V2Q96R30 315 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 MICU1Q9BPX6 476 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 SOX7Q9BT81 388 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 V9GYS6 101 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 ARID1AO14497 2285 aa14.52□□□□□ -0.09
HDAC6-235ENST00000495515 F5H5P2 479 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 H0YL77 283 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 IFNL4K9M1U5 179 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 CD200P41217 278 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 GTF2A1P52655 376 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-235ENST00000495515 BDH1Q02338 343 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 SLC3A1Q07837 685 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 PRDX4Q13162 271 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 CDK5R1Q15078 307 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 KRT74Q7RTS7 529 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 ZDHHC23Q8IYP9 409 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 ITLN1Q8WWA0 313 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 ERGIC1Q969X5 290 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 CHODLQ9H9P2 273 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 LRRC42Q9Y546 428 aa14.51□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF850A8MQ14 1090 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 OGG1O15527 345 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 CDC14BO60729 498 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 ZFPL1O95159 310 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 SERPINA3P01011 423 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 MT-ND2P03891 347 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 FAHP16930 419 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 TMEM33P57088 247 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 IRF3Q14653 427 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 SPHARQ15513 63 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 CLVS2Q5SYC1 327 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 RDH10Q8IZV5 341 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF485Q8NCK3 441 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 SGCDQ92629 289 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 SMIM19Q96E16 107 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 Q96MF0 132 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 PIMREGQ9BSJ6 248 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 RTL8AQ9BWD3 113 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 PPP1R3CQ9UQK1 317 aa14.5□□□□□ -0.09
HDAC6-235ENST00000495515 LRRC30A6NM36 301 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 GATBO75879 557 aaKnown RBP14.49□□□□□ -0.09
HDAC6-235ENST00000495515 NRASP01111 189 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 SLC25A16P16260 332 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF20P17024 532 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 COL8A2P25067 703 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 GATA4P43694 442 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 ACSM1Q08AH1 577 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 MED22Q15528 200 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 SPNS3Q6ZMD2 512 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 DNM1P46Q6ZS02 220 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 KRTAP1-3Q8IUG1 177 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 SVOPQ8N4V2 548 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 WFDC11Q8NEX6 87 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms