RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SYNDIG1Q9H7V2 258 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 GEMIN7Q9H840 131 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 FANCEQ9HB96 536 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 CCNB1IP1Q9NPC3 277 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 CCDC59Q9P031 241 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 SLC17A4Q9Y2C5 497 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 MUC6Q6W4X9 2439 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 IGSF9BQ9UPX0 1349 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 PRRC2BQ5JSZ5 2229 aaKnown RBP2.64□□□□□ -1.99
SMC4-224ENST00000494612 MYO15AQ9UKN7 3530 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 MCM3APO60318 1980 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 IGHV5-10-1A0A0J9YXX1 117 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 SLC9A3R1O14745 358 aaPredicted RBP2.64□□□□□ -1.99
SMC4-224ENST00000494612 CTAG2O75638 210 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 CCNB2O95067 398 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 ARG1P05089 322 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 CCNB1P14635 433 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 IGFBP3P17936 291 aaPredicted RBP2.64□□□□□ -1.99
SMC4-224ENST00000494612 OR1E1P30953 314 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 CASQ1P31415 396 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 SLC1A2P43004 574 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 OR1G1P47890 313 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 CDKN2DP55273 166 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 DEFB103AP81534 67 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 TMED1Q13445 227 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 DOC2AQ14183 400 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 TRAM2Q15035 370 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 UBE2SQ16763 222 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 TCEAL5Q5H9L2 206 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 FAM78AQ5JUQ0 283 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 IGFL3Q6UXB1 125 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 KATNAL2Q8IYT4 538 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 SNX31Q8N9S9 440 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 OR52K1Q8NGK4 314 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 UBALD1Q8TB05 177 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 NRGNQ92686 78 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 DYNLL2Q96FJ2 89 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 TIMM17AQ99595 171 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 TEKT3Q9BXF9 490 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 CLSTN2Q9H4D0 955 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 ZNF355PQ9NSJ1 428 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 NECAP2Q9NVZ3 263 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 MRPL22Q9NWU5 206 aaKnown RBP2.64□□□□□ -1.99
SMC4-224ENST00000494612 CHTOPQ9Y3Y2 248 aaKnown RBP2.64□□□□□ -1.99
SMC4-224ENST00000494612 KMT2EQ8IZD2 1858 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 MYO5AQ9Y4I1 1855 aaKnown RBP2.64□□□□□ -1.99
SMC4-224ENST00000494612 PHLPP2Q6ZVD8 1323 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 RAD50Q92878 1312 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 PTPRSQ13332 1948 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 PIKFYVEQ9Y2I7 2098 aa2.64□□□□□ -1.99
SMC4-224ENST00000494612 COL4A6Q14031 1691 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 DMDP11532 3685 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 LYRM9A8MSI8 78 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 RAD51BO15315 384 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 SERPINE2P07093 398 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ERCC1P07992 297 aaPredicted RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 CD3GP09693 182 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ZNF806P0C7X5 589 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 IGHV1-8P0DP01 117 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 CSNK2A2P19784 350 aaPredicted RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 NPY1RP25929 384 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 KIR3DL2P43630 455 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 UBE2MP61081 183 aaKnown RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 UBE2NP61088 152 aaKnown RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 ESRRGP62508 458 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 SIGLEC14Q08ET2 396 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 DNAJC3Q13217 504 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ORMDL2Q53FV1 153 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 SMUG1Q53HV7 270 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ZNF684Q5T5D7 378 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 PIP5KL1Q5T9C9 394 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 FBXW9Q5XUX1 488 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 SAXO2Q658L1 398 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 TWF2Q6IBS0 349 aaKnown RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 TMEM220Q6QAJ8 160 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 TMEM205Q6UW68 189 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 MYOCDQ8IZQ8 938 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 LGI3Q8N145 548 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 NOXO1Q8NFA2 376 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 PIFOQ8TCI5 191 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 APH1BQ8WW43 257 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 FRZBQ92765 325 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 TMEM230Q96A57 120 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ZNF317Q96PQ6 595 aaPredicted RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 GSDMAQ96QA5 445 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ZNF382Q96SR6 550 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 ACTR3CQ9C0K3 210 aaPredicted RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 RPP21Q9H633 154 aaKnown RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 AUNIPQ9H7T9 357 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 CHRAC1Q9NRG0 131 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 PDP1Q9P0J1 537 aaPredicted RBP2.63□□□□□ -1.99
SMC4-224ENST00000494612 ZNF835Q9Y2P0 537 aa2.63□□□□□ -1.99
SMC4-224ENST00000494612 PLXNA3P51805 1871 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 NLRC5Q86WI3 1866 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 DCHS1Q96JQ0 3298 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 A0A1B0GTQ1 180 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 FAM25EA8MYX2 175 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 GOLGA8TH3BQL2 631 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 H7C417 338 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 NDUFAB1O14561 156 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms