RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 UBASH3BQ8TF42 649 aa12.19□□□□□ -0.46
VPS26A-205ENST00000489656 PIGTQ969N2 578 aa12.19□□□□□ -0.46
VPS26A-205ENST00000489656 WDFY2Q96P53 400 aa12.19□□□□□ -0.46
VPS26A-205ENST00000489656 TECTBQ96PL2 329 aa12.19□□□□□ -0.46
VPS26A-205ENST00000489656 A6NIN4 97 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 FAM90A27PA6NNH2 459 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 M0R1B8 84 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 CST4P01036 141 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 THBDP07204 575 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 CALCBP10092 127 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 SLC2A2P11168 524 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-205ENST00000489656 RAC2P15153 192 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 CALCRP30988 508 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 ETV6P41212 452 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 RANBP1P43487 201 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 HLXQ14774 488 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-205ENST00000489656 UBE2V2Q15819 145 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 DDI2Q5TDH0 399 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 ZNF808Q8N4W9 903 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-205ENST00000489656 DNAAF1Q8NEP3 725 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 OR56B2PQ8NGI1 322 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 OR6M1Q8NGM8 313 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 CMTM3Q96MX0 182 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 UQCC2Q9BRT2 126 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 METTL17Q9H7H0 456 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-205ENST00000489656 KCNJ16Q9NPI9 418 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 AKIP1Q9NQ31 210 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 RHBDD3Q9Y3P4 386 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 CMAHPQ9Y471 501 aa12.18□□□□□ -0.46
VPS26A-205ENST00000489656 ZFYVE26Q68DK2 2539 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SMG1Q96Q15 3661 aaKnown RBP12.17□□□□□ -0.46
VPS26A-205ENST00000489656 IGKV1-9A0A0C4DH69 117 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 GGT3PA6NGU5 568 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CD300LBA8K4G0 201 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CTDSP2O14595 271 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CRYAAP02489 173 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 FAM157BP0CG42 384 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SELEP16581 610 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 PTAFRP25105 342 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CD40P25942 277 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CAPZA1P52907 286 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 NKX6-1P78426 367 aaPredicted RBP12.17□□□□□ -0.46
VPS26A-205ENST00000489656 TFF3Q07654 80 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 RIN1Q13671 783 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CNN3Q15417 329 aaKnown RBP12.17□□□□□ -0.46
VPS26A-205ENST00000489656 HES5Q5TA89 166 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 XKRXQ6PP77 449 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 CCDC190Q86UF4 302 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 FTMTQ8N4E7 242 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 OR52N4Q8NGI2 321 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 OR1J1Q8NGS3 322 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SLC25A40Q8TBP6 338 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SPSB1Q96BD6 273 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 MARS2Q96GW9 593 aaKnown RBP12.17□□□□□ -0.46
VPS26A-205ENST00000489656 OR2J1Q9GZK6 312 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 NEK6Q9HC98 313 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 NGBQ9NPG2 151 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 STEAP1Q9UHE8 339 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SPATA2Q9UM82 520 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SPEF1Q9Y4P9 236 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
VPS26A-205ENST00000489656 SPTBN1Q01082 2364 aaKnown RBP12.16□□□□□ -0.46
VPS26A-205ENST00000489656 NKX2-6A6NCS4 301 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 GMDSO60547 372 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 NRASP01111 189 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 PRKACBP22694 351 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 AZGP1P25311 298 aaKnown RBP12.16□□□□□ -0.46
VPS26A-205ENST00000489656 RAB11BQ15907 218 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 MBNL2Q5VZF2 373 aaKnown RBP12.16□□□□□ -0.46
VPS26A-205ENST00000489656 LAX1Q8IWV1 398 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 MFSD4AQ8N468 514 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 TRMT10AQ8TBZ6 339 aaKnown RBP12.16□□□□□ -0.46
VPS26A-205ENST00000489656 SLC25A28Q96A46 364 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 CPNE2Q96FN4 548 aaPredicted RBP12.16□□□□□ -0.46
VPS26A-205ENST00000489656 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 SORCS2Q96PQ0 1159 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 OR51B6Q9H340 312 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 PLGRKTQ9HBL7 147 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 ABCB9Q9NP78 766 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 COMMD3Q9UBI1 195 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 ADAM30Q9UKF2 790 aa12.16□□□□□ -0.46
VPS26A-205ENST00000489656 IQCF6A8MYZ5 107 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 CLDN25C9JDP6 229 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 MAGEB3O15480 346 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 RGS5O15539 181 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 C1QL1O75973 258 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 BMP4P12644 408 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 KITLGP21583 273 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 HTR2CP28335 458 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 TNFSF8P32971 234 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms