RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 OR5AS1Q8N127 324 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 ORAI1Q96D31 301 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 HAVCR1Q96D42 359 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 RNF167Q9H6Y7 350 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 PLEKHF2Q9H8W4 249 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
CLDN11-209ENST00000489485 ENPP5Q9UJA9 477 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 LAMP3Q9UQV4 416 aa12.2□□□□□ -0.46
CLDN11-209ENST00000489485 TRDV1A0A1B0GX56 115 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 ANKRD61A6NGH8 418 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 DHRS3O75911 302 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 CCL1P22362 96 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 TGFBR1P36897 503 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 GSK3AP49840 483 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 ZMAT1Q5H9K5 638 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 ZNF611Q8N823 705 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PPIL3Q9H2H8 161 aaKnown RBP12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PLGRKTQ9HBL7 147 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 TXNL4BQ9NX01 149 aaKnown RBP12.19□□□□□ -0.46
CLDN11-209ENST00000489485 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
CLDN11-209ENST00000489485 CACNA1DQ01668 2161 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 IGLV3-9A0A075B6K5 115 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 TRBV5-5A0A0J9YX44 114 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 MTRF1O75570 445 aaKnown RBP12.19□□□□□ -0.46
CLDN11-209ENST00000489485 IGHV3-13P01766 116 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PRF1P14222 555 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 VBP1P61758 197 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 CTF1Q16619 201 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 NKPD1Q17RQ9 610 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 TMEM255AQ5JRV8 349 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 AGAP6Q5VW22 663 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PLPP7Q8NBV4 271 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 OR56B2PQ8NGI1 322 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 OR14K1Q8NGZ2 314 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 FGGYQ96C11 551 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PLEKHA1Q9HB21 404 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 ZNF275Q9NSD4 429 aaPredicted RBP12.19□□□□□ -0.46
CLDN11-209ENST00000489485 TAAR3PQ9P1P4 343 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
CLDN11-209ENST00000489485 FBN2P35556 2912 aa12.19□□□□□ -0.46
CLDN11-209ENST00000489485 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 POLQO75417 2590 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 PLSCR5A0PG75 271 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 CD300LBA8K4G0 201 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 B9A039 149 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 GABARAPO95166 117 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 SOD3P08294 240 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 SELEP16581 610 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 ACKR3P25106 362 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 MAP2K3P46734 347 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 TMBIM6P55061 237 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 NCS1P62166 190 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 TNK1Q13470 666 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 SEMA6DQ8NFY4 1073 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 RAB2BQ8WUD1 216 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 DERL3Q96Q80 235 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 NOX4Q9NPH5 578 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 CBLN4Q9NTU7 201 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 PIGLQ9Y2B2 252 aa12.18□□□□□ -0.46
CLDN11-209ENST00000489485 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
CLDN11-209ENST00000489485 PIN1P1O15428 100 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 GATBO75879 557 aaKnown RBP12.17□□□□□ -0.46
CLDN11-209ENST00000489485 CD2P06729 351 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 DANCRP0C864 163 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 FAHP16930 419 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 ZNF12P17014 697 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 KITLGP21583 273 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 FGF9P31371 208 aaPredicted RBP12.17□□□□□ -0.46
CLDN11-209ENST00000489485 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 SNRPD2P62316 118 aaKnown RBP12.17□□□□□ -0.46
CLDN11-209ENST00000489485 OR8B8Q15620 311 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 EFNB3Q15768 340 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 MOGQ16653 247 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 UNQ9370/PRO34162Q6UXP9 181 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 GDPGP1Q6ZNW5 385 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 C12orf43Q96C57 262 aaKnown RBP12.17□□□□□ -0.46
CLDN11-209ENST00000489485 ADAT3Q96EY9 351 aaPredicted RBP12.17□□□□□ -0.46
CLDN11-209ENST00000489485 GPR160Q9UJ42 338 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 GSTK1Q9Y2Q3 226 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 V9GYS6 101 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 APCP25054 2843 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 LOC390937A0A1W2PQ73 354 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 IQCF6A8MYZ5 107 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 M0R233 179 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 LILRA1O75019 489 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 GALP22466 123 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
CLDN11-209ENST00000489485 GNALP38405 381 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 DDOSTP39656 456 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 EVX1P49640 407 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 KRTAP10-9P60411 292 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 RIPPLY1Q0D2K3 151 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 MST1LQ2TV78 715 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 C20orf204Q6ZNR8 217 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms