RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF320A2RRD8 509 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 CCR5P51681 352 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 LSRQ86X29 649 aaPredicted RBP15.83■□□□□ 0.13
NPHP4-209ENST00000489180 CLRN3Q8NCR9 226 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 OR1N1Q8NGS0 311 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 HMGCLL1Q8TB92 370 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 ZNF251Q9BRH9 671 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 EGLN1Q9GZT9 426 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 ADGRL4Q9HBW9 690 aa15.83■□□□□ 0.13
NPHP4-209ENST00000489180 RNASEK-C17orf49H0YIS7 233 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 H3BMH7 237 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 COX5AP20674 150 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 MPGP29372 298 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 MVDP53602 400 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 FAM53BQ14153 422 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 HGDQ93099 445 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 MFRPQ9BY79 579 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 LAMP3Q9UQV4 416 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 ATP23Q9Y6H3 246 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-209ENST00000489180 DHODHQ02127 395 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF561Q8N587 486 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 NUP205Q92621 2012 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 ITGB4P16144 1822 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-209ENST00000489180 MED19A0JLT2 244 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-209ENST00000489180 NDUFB6O95139 128 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 TIGITQ495A1 244 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF628Q5EBL2 1059 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 KCNE4Q8WWG9 221 aa15.83■□□□□ 0.12
NPHP4-209ENST00000489180 ESRP2Q9H6T0 727 aaKnown RBP15.83■□□□□ 0.12
NPHP4-209ENST00000489180 ANKUB1A6NFN9 424 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF425Q6IV72 752 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 NHLRC1Q6VVB1 395 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 PLPPR2Q96GM1 343 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 CLEC18AA5D8T8 446 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 HOXB3P14651 431 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-209ENST00000489180 ZP3P21754 424 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 PCMT1P22061 227 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 SSBP1Q04837 148 aaKnown RBP15.82■□□□□ 0.12
NPHP4-209ENST00000489180 RTL8BQ17RB0 113 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 SLC38A6Q8IZM9 456 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 MUC20Q8N307 709 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-209ENST00000489180 CLEC18CQ8NCF0 446 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 PELI1Q96FA3 418 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 TUBAL3A6NHL2 446 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 FCER1GP30273 86 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 ZNF117Q03924 483 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 CLLU1Q5K131 121 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 DTWD2Q8NBA8 298 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 C12orf10Q9HB07 376 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 GALR2O43603 387 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-209ENST00000489180 IL5P05113 134 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 TAS2R45P59539 299 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 MIDNQ504T8 468 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 PRSS41Q7RTY9 318 aa15.82■□□□□ 0.12
NPHP4-209ENST00000489180 RAB13P51153 203 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 SSX7Q7RTT5 188 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 OR8D4Q8NGM9 314 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 MRPS24Q96EL2 167 aaKnown RBP15.81■□□□□ 0.12
NPHP4-209ENST00000489180 MMP25Q9NPA2 562 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 FBXO34Q9NWN3 711 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 NDRG3Q9UGV2 375 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 SSC5DA1L4H1 1573 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 LIMS3P0CW19 117 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 LIMS4P0CW20 117 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 FGF9P31371 208 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-209ENST00000489180 TMEM267Q0VDI3 215 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-209ENST00000489180 CEACAM16Q2WEN9 425 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 KIAA1958Q8N8K9 716 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 ZFPL1O95159 310 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 CT45A10P0DMU9 189 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 H3F3AP84243 136 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 PNLIPRP3Q17RR3 467 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 PRSS42Q7Z5A4 293 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 C17orf47Q8NEP4 570 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 ARHGAP5-AS1Q96IT6 56 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 EDEM2Q9BV94 578 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 LRRC61Q9BV99 259 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 RBM38Q9H0Z9 239 aaKnown RBP15.81■□□□□ 0.12
NPHP4-209ENST00000489180 COL22A1Q8NFW1 1626 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-209ENST00000489180 CSN1S1P47710 185 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 LIMK1P53667 647 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 HLXQ14774 488 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-209ENST00000489180 TMPRSS11FQ6ZWK6 438 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 OR10G3Q8NGC4 313 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 F2RP25116 425 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 FAM122AQ96E09 287 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 MVB12AQ96EY5 273 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 PROCRQ9UNN8 238 aa15.81■□□□□ 0.12
NPHP4-209ENST00000489180 GLB1P16278 677 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 PCBP4P57723 403 aaKnown RBP15.8■□□□□ 0.12
NPHP4-209ENST00000489180 CXorf67Q86X51 503 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-209ENST00000489180 CTDSP1Q9GZU7 261 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 SERGEFQ9UGK8 458 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 LOXL2Q9Y4K0 774 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 PLPP2O43688 288 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 WFDC8Q8IUA0 241 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ARHGEF39Q8N4T4 335 aa15.8■□□□□ 0.12
NPHP4-209ENST00000489180 ADPRHL1Q8NDY3 354 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms