RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 IGHV3-20A0A0C4DH32 117 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 UPK1AO00322 258 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 TSPAN12O95859 305 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 FOXC1Q12948 553 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 DHRS2Q13268 280 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
RXRA-203ENST00000484822 MED29Q9NX70 200 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 PSENENQ9NZ42 101 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 C2CD4DB7Z1M9 353 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
RXRA-203ENST00000484822 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
RXRA-203ENST00000484822 EMC4Q5J8M3 183 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 CA5BP1Q8WTZ4 195 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 TIMD4Q96H15 378 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 SHARPINQ9H0F6 387 aa13.65□□□□□ -0.22
RXRA-203ENST00000484822 EIF4E2O60573 245 aaKnown RBP13.65□□□□□ -0.23
RXRA-203ENST00000484822 KCNAB1Q14722 419 aa13.65□□□□□ -0.23
RXRA-203ENST00000484822 ACOT6Q3I5F7 207 aaPredicted RBP13.65□□□□□ -0.23
RXRA-203ENST00000484822 GOT1L1Q8NHS2 421 aaPredicted RBP13.65□□□□□ -0.23
RXRA-203ENST00000484822 SLC37A2Q8TED4 501 aa13.65□□□□□ -0.23
RXRA-203ENST00000484822 GINS3Q9BRX5 216 aa13.65□□□□□ -0.23
RXRA-203ENST00000484822 LYRM4Q9HD34 91 aa13.65□□□□□ -0.23
RXRA-203ENST00000484822 OR5V1Q9UGF6 321 aa13.65□□□□□ -0.23
RXRA-203ENST00000484822 SLC17A2O00624 439 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 LY86O95711 162 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 BSGP35613 385 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 SP6Q3SY56 376 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 SEZ6L2Q6UXD5 910 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 MSRB3Q8IXL7 192 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 BCORP1Q8N888 145 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 R4GMQ9 66 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 PLRG1O43660 514 aaKnown RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 CST4P01036 141 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 MMP7P09237 267 aaPredicted RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 SSBP1Q04837 148 aaKnown RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 OR6S1Q8NH40 331 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 ZNRF4Q8WWF5 429 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 A4GNTQ9UNA3 340 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 K7EQM0 130 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 SELENOPP49908 381 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 MAML2Q8IZL2 1156 aaPredicted RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 TRAPPC1Q9Y5R8 145 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 A0A1B0GX78 115 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 PRSS37A4D1T9 235 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 LIMS3P0CW19 117 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 LIMS4P0CW20 117 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 USF1P22415 310 aaPredicted RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 PLA1AQ53H76 456 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 TMEM196Q5HYL7 178 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
RXRA-203ENST00000484822 OR5AS1Q8N127 324 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 OR52N5Q8NH56 324 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 ISOC2Q96AB3 205 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 ABHD1Q96SE0 405 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 ARRDC1-AS1Q9H2J1 176 aa13.64□□□□□ -0.23
RXRA-203ENST00000484822 TRBV5-4A0A0C4DH59 114 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 PRR35P0CG20 571 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 SLC25A6P12236 298 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 RAG2P55895 527 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 ARL16Q0P5N6 197 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 HSD17B13Q7Z5P4 300 aaPredicted RBP13.63□□□□□ -0.23
RXRA-203ENST00000484822 POM121Q96HA1 1249 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 PBOV1Q9GZY1 135 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 RAB18Q9NP72 206 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 ZNF355PQ9NSJ1 428 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 FOXJ3Q9UPW0 622 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 CLDN34H7C241 214 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 PPP1R1AQ13522 171 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 NKAIN2Q5VXU1 208 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 TIPARPQ7Z3E1 657 aaKnown RBP13.63□□□□□ -0.23
RXRA-203ENST00000484822 TP53I13Q8NBR0 393 aaPredicted RBP13.63□□□□□ -0.23
RXRA-203ENST00000484822 KCNE4Q8WWG9 221 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 MIOXQ9UGB7 285 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 KLF13Q9Y2Y9 288 aaPredicted RBP13.63□□□□□ -0.23
RXRA-203ENST00000484822 M0R135 149 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 SEMG1P04279 462 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 CXCL3P19876 107 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 PPP1CBP62140 327 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 ZNF799Q96GE5 643 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 NMES1Q9C002 83 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 SIRT3Q9NTG7 399 aaPredicted RBP13.63□□□□□ -0.23
RXRA-203ENST00000484822 ANKRD10Q9NXR5 420 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 A0A087X0M5 115 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 SERTM2A0A1B0GWG4 89 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 A0A1B0GX30 115 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 ARG1P05089 322 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 PMS2P11Q13670 270 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 MOB1AQ9H8S9 216 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 TBC1D29Q9UFV1 150 aa13.63□□□□□ -0.23
RXRA-203ENST00000484822 A0A1W2PNR3 127 aa13.62□□□□□ -0.23
RXRA-203ENST00000484822 XKRY2A2RUG3 117 aa13.62□□□□□ -0.23
RXRA-203ENST00000484822 LYPD8Q6UX82 237 aa13.62□□□□□ -0.23
RXRA-203ENST00000484822 CNRIP1Q96F85 164 aaPredicted RBP13.62□□□□□ -0.23
RXRA-203ENST00000484822 MS4A10Q96PG2 267 aa13.62□□□□□ -0.23
RXRA-203ENST00000484822 LANCL2Q9NS86 450 aa13.62□□□□□ -0.23
RXRA-203ENST00000484822 YBX2Q9Y2T7 364 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms