RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 KCNG3Q8TAE7 436 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 CASTOR1Q8WTX7 329 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 MAFIPQ8WZ33 124 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 NUDT16L1Q9BRJ7 211 aaKnown RBP12.33□□□□□ -0.44
PHF3-204ENST00000481385 MFNGO00587 321 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 KCNAB3O43448 404 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 CBR3O75828 277 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 CHRM2P08172 466 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 OTX1P32242 354 aaPredicted RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 ATP1B3P54709 279 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 IL13RA1P78552 427 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 RGS7BPQ6MZT1 257 aaPredicted RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 ZNF546Q86UE3 836 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 NAXDQ8IW45 347 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 FBXW5Q969U6 566 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 ULBP2Q9BZM5 246 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 ANAPC10Q9UM13 185 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 PLEKHA6Q9Y2H5 1048 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 V9GYS6 101 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 SPENQ96T58 3664 aaKnown RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 KIAA1549Q9HCM3 1950 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 STMND1H3BQB6 276 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 STARP49675 285 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 DUSP3P51452 185 aaPredicted RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 GMFBP60983 142 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 TMEM65Q6PI78 240 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 GGNQ86UU5 652 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 C1orf210Q8IVY1 113 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 ZDHHC22Q8N966 263 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 MITD1Q8WV92 249 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 RBPMSQ93062 196 aaKnown RBP12.32□□□□□ -0.44
PHF3-204ENST00000481385 PIGTQ969N2 578 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 PLEK2Q9NYT0 353 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
PHF3-204ENST00000481385 hCG_1807616A0A1W2PRN6 198 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 ZSCAN5BA6NJL1 495 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 FOXI3A8MTJ6 420 aaPredicted RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 DHRS3O75911 302 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PATE4P0C8F1 98 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 VAMP1P23763 118 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 GUCA1AP43080 201 aaPredicted RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 PTGFRP43088 359 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 SUCLG1P53597 346 aaKnown RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 CSNK2A1P68400 391 aaPredicted RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 GK2Q14410 553 aaPredicted RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 ATXN7L3Q14CW9 347 aaPredicted RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 BEX5Q5H9J7 111 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 HOGA1Q86XE5 327 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 C20orf196Q8IYI0 205 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 OR2AE1Q8NHA4 323 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 SCARB1Q8WTV0 552 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PPP1R1CQ8WVI7 109 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PIGQQ9BRB3 760 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PDCD10Q9BUL8 212 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PIGLQ9Y2B2 252 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 KCNMB2Q9Y691 235 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 MFSD2BA6NFX1 497 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 FAM25EA8MYX2 175 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 M0R135 149 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 SCGNO76038 276 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 VAMP5O95183 116 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PRF1P14222 555 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 PI3P19957 117 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 ECH1Q13011 328 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 ARMC10Q8N2F6 343 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 OR6K3Q8NGY3 331 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 ROBO4Q8WZ75 1007 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 NAA11Q9BSU3 229 aaPredicted RBP12.31□□□□□ -0.44
PHF3-204ENST00000481385 SDHAF2Q9NX18 166 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 COQ3Q9NZJ6 369 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 TCFL5Q9UL49 500 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 TECTAO75443 2155 aa12.31□□□□□ -0.44
PHF3-204ENST00000481385 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 A0A0U1RQV5 110 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 PINLYPA6NC86 204 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 IFNA6P05013 189 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 GSTP1P09211 210 aaKnown RBP12.3□□□□□ -0.44
PHF3-204ENST00000481385 NAT1P18440 290 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 SERPINA2P20848 420 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 ACKR3P25106 362 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 NPY4RP50391 375 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 CLDN15P56746 228 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
PHF3-204ENST00000481385 ZXDAP98168 799 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 BAMBIQ13145 260 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 CCDC157Q569K6 752 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
PHF3-204ENST00000481385 RELL2Q8NC24 303 aaPredicted RBP12.3□□□□□ -0.44
PHF3-204ENST00000481385 OR51T1Q8NGJ9 327 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 363 ms