RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 TUBG1P23258 451 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 DDOSTP39656 456 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 MMP15P51511 669 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 UBE2V2Q15819 145 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 MST1LQ2TV78 715 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 ZNF718Q3SXZ3 478 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 CEP78Q5JTW2 689 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 SP5Q6BEB4 398 aaPredicted RBP11.19□□□□□ -0.62
CHD3-210ENST00000479080 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 BHLHE23Q8NDY6 225 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 OR5L1Q8NGL2 311 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 C12orf43Q96C57 262 aaKnown RBP11.19□□□□□ -0.62
CHD3-210ENST00000479080 NKX3-1Q99801 234 aaPredicted RBP11.19□□□□□ -0.62
CHD3-210ENST00000479080 CHST5Q9GZS9 411 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 TUBG2Q9NRH3 451 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 GPR173Q9NS66 373 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 KCNN3Q9UGI6 736 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 SSR3Q9UNL2 185 aa11.19□□□□□ -0.62
CHD3-210ENST00000479080 RAI1Q7Z5J4 1906 aaPredicted RBP11.18□□□□□ -0.62
CHD3-210ENST00000479080 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 SMIM30A4D0T7 59 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 GGT3PA6NGU5 568 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 ZSCAN5BA6NJL1 495 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 H0YL77 283 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 MLNRO43193 412 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 SERPINA3P01011 423 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 CST4P01036 141 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 CFL1P23528 166 aaKnown RBP11.18□□□□□ -0.62
CHD3-210ENST00000479080 CALRP27797 417 aaKnown RBP11.18□□□□□ -0.62
CHD3-210ENST00000479080 MAP2K3P46734 347 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 TMBIM6P55061 237 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 RPS23P62266 143 aaKnown RBP11.18□□□□□ -0.62
CHD3-210ENST00000479080 RIPPLY1Q0D2K3 151 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 HNRNPA0Q13151 305 aaKnown RBP11.18□□□□□ -0.62
CHD3-210ENST00000479080 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 ZBTB37Q5TC79 503 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 HIST2H2BCQ6DN03 193 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 GDPGP1Q6ZNW5 385 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 CCDC54Q8NEL0 328 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 OR13C9Q8NGT0 318 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 SYNPRQ8TBG9 265 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 SPEF1Q9Y4P9 236 aa11.18□□□□□ -0.62
CHD3-210ENST00000479080 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
CHD3-210ENST00000479080 IGKV1-27A0A075B6S5 117 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 ZNF816-ZNF321PA0A0X1KG74 233 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 ZNF850A8MQ14 1090 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 GMDSO60547 372 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 MTRF1O75570 445 aaKnown RBP11.17□□□□□ -0.62
CHD3-210ENST00000479080 RAF1P04049 648 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 OR4A8P0C604 315 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 CD37P11049 281 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
CHD3-210ENST00000479080 OR10A3P58181 314 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 HSD17B12Q53GQ0 312 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 UTS2BQ765I0 119 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 WDR86Q86TI4 376 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 C1orf174Q8IYL3 243 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 DNAAF1Q8NEP3 725 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 OR8G5Q8NG78 346 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 RAB2BQ8WUD1 216 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 PIGTQ969N2 578 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
CHD3-210ENST00000479080 POU2F3Q9UKI9 436 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 CMAHPQ9Y471 501 aa11.17□□□□□ -0.62
CHD3-210ENST00000479080 FBN2P35556 2912 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 USP9YO00507 2555 aaPredicted RBP11.16□□□□□ -0.62
CHD3-210ENST00000479080 TRAV1-2A0A0B4J238 106 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 CTAG2O75638 210 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 NCR1O76036 304 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 CD8AP01732 235 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 DANCRP0C864 163 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 ZNF12P17014 697 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 ZNF20P17024 532 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 ATF1P18846 271 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 CA6P23280 308 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 MAPK3P27361 379 aaPredicted RBP11.16□□□□□ -0.62
CHD3-210ENST00000479080 GCH1P30793 250 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 SDC2P34741 201 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 RBMXP38159 391 aaKnown RBP11.16□□□□□ -0.62
CHD3-210ENST00000479080 ALDH3B1P43353 468 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 MTNR1BP49286 362 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 CAV3P56539 151 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 PRDX4Q13162 271 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 EFNB3Q15768 340 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 SWI5Q1ZZU3 235 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 TIMM50Q3ZCQ8 353 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 CLVS2Q5SYC1 327 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 C11orf71Q6IPW1 123 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 CSNK2A3Q8NEV1 391 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 OR1M1Q8NGA1 313 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 ZNF420Q8TAQ5 688 aaPredicted RBP11.16□□□□□ -0.62
CHD3-210ENST00000479080 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 PIGCQ92535 297 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 C10orf35Q96D05 121 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 ITPKCQ96DU7 683 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 SPACA5Q96QH8 159 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 DHRS9Q9BPW9 319 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 BCL7BQ9BQE9 202 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms