RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 MBOAT2Q6ZWT7 520 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 EFL1Q7Z2Z2 1120 aaKnown RBP-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 C2orf73Q8N5S3 287 aaPredicted RBP-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 OR6Q1Q8NGQ2 317 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 OR2V1Q8NHB1 315 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 PEX13Q92968 403 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 ECHDC3Q96DC8 303 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 TMEM43Q9BTV4 400 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 ETNK2Q9NVF9 386 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 RBFOX1Q9NWB1 397 aaKnown RBP-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 SHANK3Q9BYB0 1731 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 LCTP09848 1927 aa-0.11□□□□□ -2.43
NCKAP1-204ENST00000477988 ZNF729A6NN14 1252 aaPredicted RBP-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 RAD51CO43502 376 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 GPX1P07203 203 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 TROVE2P10155 538 aaKnown RBP eCLIP-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 CFHR2P36980 270 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 NSG1P42857 185 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 SSR1P43307 286 aaKnown RBP-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 SEC61GP60059 68 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 SP4Q02446 784 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 ATP5G2Q06055 141 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 ZNF829Q3KNS6 432 aaPredicted RBP-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 C6orf99Q4VX62 202 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 COMTD1Q86VU5 262 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 TGIF2LXQ8IUE1 241 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 SELENOHQ8IZQ5 122 aaKnown RBP-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 OR8K1Q8NGG5 319 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 KCNG3Q8TAE7 436 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 DCANP1Q8TF63 244 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 NRBF2Q96F24 287 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 SLC41A3Q96GZ6 507 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 OR52B2Q96RD2 323 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 ANKRD60Q9BZ19 345 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 TOLLIPQ9H0E2 274 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 DBNDD1Q9H9R9 158 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 RGS18Q9NS28 235 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 NAV2Q8IVL1 2488 aa-0.12□□□□□ -2.43
NCKAP1-204ENST00000477988 A0A1B0GWJ7 208 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 SMCO2A6NFE2 343 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 LYRM9A8MSI8 78 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 FNDC10F2Z333 226 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 SLC19A2O60779 497 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 SNNO75324 88 aaPredicted RBP-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 CXorf1O96002 111 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 ANXA5P08758 320 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 CSNK2A2P19784 350 aaPredicted RBP-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 PSMA5P28066 241 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 HTR1DP28221 377 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 HNRNPH3P31942 346 aaKnown RBP-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 TUFMP49411 452 aaKnown RBP-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 SEMG2Q02383 582 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 PPM1LQ5SGD2 360 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 HHATQ5VTY9 493 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 CYHR1Q6ZMK1 362 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 TMPRSS11AQ6ZMR5 421 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 Q6ZSR3 168 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 UBAC2Q8NBM4 344 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 TRPV1Q8NER1 839 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 NUBPLQ8TB37 319 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 RLN3Q8WXF3 142 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 ISG20Q96AZ6 181 aaKnown RBP-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 CXCL16Q9H2A7 254 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 HRASLS2Q9NWW9 162 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 LGALS13Q9UHV8 139 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 CRB1P82279 1406 aa-0.13□□□□□ -2.43
NCKAP1-204ENST00000477988 TRGV2A0A075B6R0 118 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 IGHV3OR16-9A0A0B4J2B5 98 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 A0A1W2PPE3 182 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 KNCNA6PVL3 124 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 GABRPO00591 440 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 RAB29O14966 203 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 BAG2O95816 211 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 OXTP01178 125 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 IL3RAP26951 378 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 EIF3EP60228 445 aaKnown RBP-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 RPS15AP62244 130 aaKnown RBP-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 CTAG1AP78358 180 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 LIPEQ05469 1076 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 GCSAMLQ5JQS6 135 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 MRPL2Q5T653 305 aaKnown RBP-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 NOXRED1Q6NXP6 359 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 Q6ZQT7 251 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 ZNF767PQ75MW2 155 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 ARL10Q8N8L6 244 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 RAB3IL1Q8TBN0 382 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 NAA38Q9BRA0 125 aaKnown RBP-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 SPRR2GQ9BYE4 73 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 POLE3Q9NRF9 147 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 TMEM38BQ9NVV0 291 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 SLC39A1Q9NY26 324 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 SNX6Q9UNH7 406 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 U3KQK5 164 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 CACNA1SQ13698 1873 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 FHOD3Q2V2M9 1422 aa-0.14□□□□□ -2.43
NCKAP1-204ENST00000477988 PLXNB3Q9ULL4 1909 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 PXDNLA1KZ92 1463 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 A0A0A6YYD5 115 aa-0.15□□□□□ -2.43
NCKAP1-204ENST00000477988 A0A1W2PQL4 384 aaPredicted RBP-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms