RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 B4DEV8 164 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 AQP7O14520 342 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ALOX12BO75342 701 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ERAL1O75616 437 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 FURINP09958 794 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PGA5P0DJD9 388 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ARAFP10398 606 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 GABRG2P18507 467 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 OR3A2P47893 321 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 SLC35A1P78382 337 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PDE7AQ13946 482 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 CRMP1Q14194 572 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 SMIM21Q3B7S5 101 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 DMKNQ6E0U4 476 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 FAM71E1Q6IPT2 247 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PWWP2BQ6NUJ5 590 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF343Q6P1L6 599 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 OR52E1Q8NGJ3 308 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 CNTNAP3Q9BZ76 1288 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 CNTD2Q9H8S5 307 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 NRIP3Q9NQ35 241 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 HS3ST3A1Q9Y663 406 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 TRAV30A0A087WSZ9 112 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 A0A1W2PR48 441 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 A6NJ64 397 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 IFITM5A6NNB3 132 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 RAB27BO00194 218 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 SEMA4FO95754 770 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM225BP0DP42 221 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 CDK2P24941 298 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 PSMB5P28074 263 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 GPR4P46093 362 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 TFPI2P48307 235 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 CX3CR1P49238 355 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 RAC3P60763 192 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 HTD2P86397 168 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 HIKESHIQ53FT3 197 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF311Q5JNZ3 666 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 OR56A1Q8NGH5 318 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 OR2A1Q8NGT9 310 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 ADAMTS18Q8TE60 1221 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM234Q8WY98 164 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 GNRHR2Q96P88 292 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 TIMP4Q99727 224 aa11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-207ENST00000477573 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 GPR37L1O60883 481 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 CLEC3AO75596 197 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 NDUFB8O95169 186 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 CST4P01036 141 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SRFP11831 508 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SCAND1P57086 179 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 CSNK1G2P78368 415 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 BATFQ16520 125 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 ANKRD16Q6P6B7 361 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 FCRLAQ7L513 359 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 ZSCAN4Q8NAM6 433 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 MITD1Q8WV92 249 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 TSLPQ969D9 159 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 MOB3AQ96BX8 217 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 BMFQ96LC9 184 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 CST9LQ9H4G1 147 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 STEAP1Q9UHE8 339 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 ADAM29Q9UKF5 820 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 FEZF1A0PJY2 475 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 CDHR4A6H8M9 788 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 TLCD2A6NGC4 264 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 PLPP1O14494 284 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 MMP23AO75900 390 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 ONECUT2O95948 504 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 IL2RAP01589 272 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 GAPDHP04406 335 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 GTF2F2P13984 249 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 CMPK1P30085 196 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 RND2P52198 227 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SELENOVP59797 346 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 FAM3AP98173 230 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 PRDX4Q13162 271 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms