RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 OR8J2Q8NGG1 315 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 UBA3Q8TBC4 463 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 OR5P2Q8WZ92 322 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 ANKRD7Q92527 254 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 RPUSD4Q96CM3 377 aaKnown RBP3.18□□□□□ -1.9
VPS13D-207ENST00000476169 SMIM10Q96HG1 83 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 UBE2E2Q96LR5 201 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 VAT1Q99536 393 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 PDCD1LG2Q9BQ51 273 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 CLMPQ9H6B4 373 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 ZDHHC11Q9H8X9 412 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 RGS18Q9NS28 235 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 MARCH5Q9NX47 278 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 MDFICQ9P1T7 246 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 SNX24Q9Y343 169 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 UBIAD1Q9Y5Z9 338 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 RLFQ13129 1914 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 CEP152O94986 1710 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 TECPR2O15040 1411 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 NCOA3Q9Y6Q9 1424 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 ELP1O95163 1332 aa3.18□□□□□ -1.9
VPS13D-207ENST00000476169 E9PCH4 1651 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ADGRB1O14514 1584 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 NWD1Q149M9 1564 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 SETBP1Q9Y6X0 1596 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 MYOM2P54296 1465 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 FAM240AA0A1B0GVK7 77 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 SMIM23A6NLE4 172 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF593O00488 134 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ATP6V1G2O95670 118 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 TTC4O95801 387 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 FABP3P05413 133 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ERGP11308 486 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 PSKH1P11801 424 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ICAM2P13598 275 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 P2RY4P51582 365 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 FGF8P55075 233 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 OR12D2P58182 307 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 PPP1CBP62140 327 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 CACNG7P62955 275 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 SLC35A1P78382 337 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 C2orf54Q08AI8 447 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 UAP1Q16222 522 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 OR10J3Q5JRS4 329 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 CEP85LQ5SZL2 805 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 GFI1BQ5VTD9 330 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 SDHAF4Q5VUM1 108 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 HBMQ6B0K9 141 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 EPGNQ6UW88 154 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 LINC00173Q6ZV60 143 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 Q6ZVH6 145 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF677Q86XU0 584 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 NKAPP1Q8N9T2 125 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 MCOLN3Q8TDD5 553 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 RORBQ92753 470 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 UCN3Q969E3 161 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 MARC2Q969Z3 335 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 FLYWCH2Q96CP2 140 aaKnown RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 KIR2DL4Q99706 377 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 NICN1Q9BSH3 213 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF426Q9BUY5 554 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 C19orf24Q9BVV8 132 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 DEFB127Q9H1M4 99 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 PORCNQ9H237 461 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 EDA2RQ9HAV5 297 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 SH2D2AQ9NP31 389 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 MYOZ1Q9NP98 299 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 SLCO1B3Q9NPD5 702 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ASCL3Q9NQ33 180 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 AP3M1Q9Y2T2 418 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 PRG3Q9Y2Y8 225 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 POLR3HQ9Y535 204 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 WIF1Q9Y5W5 379 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 NRXN3Q9Y4C0 1643 aa3.17□□□□□ -1.9
VPS13D-207ENST00000476169 ZC3H13Q5T200 1668 aaKnown RBP3.17□□□□□ -1.9
VPS13D-207ENST00000476169 UBR1Q8IWV7 1749 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 A0A0B4J2E0 115 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 A0A0J9YWU9 116 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM210A6NLX4 147 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 H7C417 338 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 M0R1B8 84 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 TNFSF13O75888 250 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 PTHP01270 115 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 OCM2P0CE71 109 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 THRAP10827 490 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ATF6P18850 670 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 RAB3BP20337 219 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ZP3P21754 424 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 LOXP28300 417 aaPredicted RBP3.16□□□□□ -1.9
VPS13D-207ENST00000476169 HOXA9P31269 272 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 GGT2P36268 569 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 MDH2P40926 338 aaKnown RBP3.16□□□□□ -1.9
VPS13D-207ENST00000476169 AQP5P55064 265 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 RHOAP61586 193 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 RPS23P62266 143 aaKnown RBP3.16□□□□□ -1.9
VPS13D-207ENST00000476169 IL5RAQ01344 420 aa3.16□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF45Q02386 682 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms