RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TAF13Q15543 124 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 KCNJ8Q15842 424 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 CDONQ4KMG0 1287 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 FAM76BQ5HYJ3 339 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 WDR38Q5JTN6 314 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ATPAF1Q5TC12 328 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 GPR157Q5UAW9 335 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 TREML4Q6UXN2 200 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 FAM57BQ71RH2 274 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 DHFR2Q86XF0 187 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ERI1Q8IV48 349 aaKnown RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ADGRG5Q8IZF4 528 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 HS3ST5Q8IZT8 346 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 FAM216BQ8N7L0 139 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 Q8N7P7 452 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 PNLDC1Q8NA58 520 aaKnown RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 LY6G5BQ8NDX9 201 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 BBS1Q8NFJ9 593 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 OR10G2Q8NGC3 310 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 LRRC29Q8WV35 223 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 WFDC12Q8WWY7 111 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 TNFRSF14Q92956 283 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 LHX4Q969G2 390 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ITPKCQ96DU7 683 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 CCT8L2Q96SF2 557 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 INTS14Q96SY0 518 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 CHID1Q9BWS9 393 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 RNPEPL1Q9HAU8 725 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 BRD7Q9NPI1 651 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 ACOXLQ9NUZ1 547 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 DNAJC27Q9NZQ0 273 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 BAIAP2Q9UQB8 552 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 SAMHD1Q9Y3Z3 626 aaKnown RBP5.78□□□□□ -1.48
HDAC3-207ENST00000475549 TGP01266 2768 aa5.78□□□□□ -1.48
HDAC3-207ENST00000475549 hCG_1807616A0A1W2PRN6 198 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 MEGF11A6BM72 1044 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 A6NLC8 198 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 RIIAD1A6NNX1 92 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 ANKRD30BLA7E2S9 258 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 PRR32B1ATL7 298 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 RNASEK-C17orf49H0YIS7 233 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 XRCC2O43543 280 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 RHBDL1O75783 438 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 DCTN3O75935 186 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 GLCEO94923 617 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 NDUFA7O95182 113 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 ANXA2P07355 339 aaKnown RBP5.77□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF3P17036 446 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 PRKACGP22612 351 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 DCTDP32321 178 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 GRK5P34947 590 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 DDOSTP39656 456 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 BLVRAP53004 296 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 RAG2P55895 527 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 GRB2P62993 217 aaKnown RBP5.77□□□□□ -1.49
HDAC3-207ENST00000475549 MXRA7P84157 204 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 IKZF1Q13422 519 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 GINS1Q14691 196 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 TAF9Q16594 264 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 DGUOKQ16854 277 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 MICBQ29980 383 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 C11orf91Q3C1V1 193 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 DMRTC1Q5HYR2 192 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 PLBD1Q6P4A8 553 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 KRT74Q7RTS7 529 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 VMO1Q7Z5L0 202 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 GALNT4Q8N4A0 578 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 TMEM86BQ8N661 226 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 OR6N2Q8NGY6 317 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 OR8S1Q8NH09 359 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 LINC01006Q8NI28 216 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 CANT1Q8WVQ1 401 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 HPSE2Q8WWQ2 592 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 GATAD2BQ8WXI9 593 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 OR5P3Q8WZ94 311 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 ST8SIA4Q92187 359 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 RPL3LQ92901 407 aaKnown RBP5.77□□□□□ -1.49
HDAC3-207ENST00000475549 PPP1R14AQ96A00 147 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 AJUBAQ96IF1 538 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 FAM71F1Q96KD3 344 aaPredicted RBP5.77□□□□□ -1.49
HDAC3-207ENST00000475549 CITED1Q99966 193 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 OR51V1Q9H2C8 321 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 SEMA6AQ9H2E6 1030 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 TOR3AQ9H497 397 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 REEP1Q9H902 201 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 SP140LQ9H930 580 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 SNTG1Q9NSN8 517 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 C14orf119Q9NWQ9 140 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 NDE1Q9NXR1 346 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 NOP16Q9Y3C1 178 aaKnown RBP5.77□□□□□ -1.49
HDAC3-207ENST00000475549 POMT1Q9Y6A1 747 aa5.77□□□□□ -1.49
HDAC3-207ENST00000475549 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 CLPSL1A2RUU4 121 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF850A8MQ14 1090 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 H3BN98 237 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 AKR7A2O43488 359 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 ECDO95905 644 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-207ENST00000475549 CST4P01036 141 aa5.76□□□□□ -1.49
HDAC3-207ENST00000475549 CST1P01037 141 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms