RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NANOS3P60323 173 aaKnown RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 VBP1P61758 197 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 NCS1P62166 190 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 LSM3P62310 102 aaKnown RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 MALLQ13021 153 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 KRTAP27-1Q3LI81 207 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 HIKESHIQ53FT3 197 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 HSD17B12Q53GQ0 312 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 ZMAT1Q5H9K5 638 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 TIMM23BQ5SRD1 257 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 OTPQ5XKR4 325 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 C22orf42Q6IC83 251 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 UNQ9370/PRO34162Q6UXP9 181 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 C3P1Q6ZMU1 363 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 DOK3Q7L591 496 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 CXorf67Q86X51 503 aaPredicted RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 COMMD2Q86X83 199 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 PRSS35Q8N3Z0 413 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 NAXEQ8NCW5 288 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 OR5L1Q8NGL2 311 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 AKR7LQ8NHP1 331 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 HSD17B8Q92506 261 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 AP3S1Q92572 193 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 AKAP1Q92667 903 aaKnown RBP eCLIP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 HTRA1Q92743 480 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 RPL3LQ92901 407 aaKnown RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 APOBEC3DQ96AK3 386 aaPredicted RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 LURAP1Q96LR2 239 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 DERL3Q96Q80 235 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 PDCD1LG2Q9BQ51 273 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 CENPOQ9BU64 300 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 OPN3Q9H1Y3 402 aaPredicted RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 NEK6Q9HC98 313 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 TCF7L1Q9HCS4 588 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 SNTG1Q9NSN8 517 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 B3GNT2Q9NY97 397 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 EIF3KQ9UBQ5 218 aaKnown RBP5.75□□□□□ -1.49
VAMP3-202ENST00000470357 Q9UFV3 132 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 SH3BGRL2Q9UJC5 107 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 PLA2G2DQ9UNK4 145 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 DHDHQ9UQ10 334 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 SLC22A13Q9Y226 551 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 OSGIN2Q9Y236 505 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 VPS13CQ709C8 3753 aa5.75□□□□□ -1.49
VAMP3-202ENST00000470357 LOC107986453A0A1B0GWG9 222 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 A0A1W2PPW3 197 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ANKRD61A6NGH8 418 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 C16orf97H3BN30 126 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ZG16O60844 167 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 IGKV3-15P01624 115 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 LCATP04180 440 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ERCC1P07992 297 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 PATE4P0C8F1 98 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 CCL1P22362 96 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 NR4A1P22736 598 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 APEX1P27695 318 aaKnown RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 CALRP27797 417 aaKnown RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ASCL1P50553 236 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 CAPZA1P52907 286 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 FOXG1P55316 489 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 RPS11P62280 158 aaKnown RBP eCLIP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 PPP3R1P63098 170 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 MFGE8Q08431 387 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 DYNC1I2Q13409 638 aaKnown RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 SPCS2Q15005 226 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 FBXL19-AS1Q494R0 122 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ZNF474Q6S9Z5 364 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 STAC2Q6ZMT1 411 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 TMEM91Q6ZNR0 172 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 COLCA1Q6ZS62 124 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 Q6ZSR3 168 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 FAM57BQ71RH2 274 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 PGAP1Q75T13 922 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 PRSS45Q7RTY3 260 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 MDP1Q86V88 176 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 SERPINA12Q8IW75 414 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 FTMTQ8N4E7 242 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 RPRMLQ8N4K4 120 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 SLC30A7Q8NEW0 376 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 OR8B12Q8NGG6 310 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 OR5D14Q8NGL3 314 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 OR13C3Q8NGS6 347 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 DYNC2LI1Q8TCX1 351 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ACOT12Q8WYK0 555 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 TMEM106AQ96A25 262 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 TECTBQ96PL2 329 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 OR14A2Q96R54 314 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 KCNS3Q9BQ31 491 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 MRI1Q9BV20 369 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 C1QTNF5Q9BXJ0 243 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 PLEKHA1Q9HB21 404 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 CDH20Q9HBT6 801 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 NGBQ9NPG2 151 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 TBCCD1Q9NVR7 557 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 ZNF224Q9NZL3 707 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 JKAMPQ9P055 326 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 CRNNQ9UBG3 495 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 FOXJ3Q9UPW0 622 aa5.74□□□□□ -1.49
VAMP3-202ENST00000470357 MAP1AP78559 2803 aaPredicted RBP5.74□□□□□ -1.49
VAMP3-202ENST00000470357 TRBV5-7A0A0A0MS05 114 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms