RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 C5orf63A6NC05 138 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 ZNF879B4DU55 563 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 F5H5K5 113 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 H7C417 338 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 M0R135 149 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 P2RY10O00398 339 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 PHF1O43189 567 aaPredicted RBP11.69□□□□□ -0.54
LINC00173-201ENST00000470091 TTRP02766 147 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 ANXA2P07355 339 aaKnown RBP11.69□□□□□ -0.54
LINC00173-201ENST00000470091 FAM157CP0CG43 387 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 CD79AP11912 226 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 SLC25A16P16260 332 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 ACHEP22303 614 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 SDC2P34741 201 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 RPS19P39019 145 aaKnown RBP11.69□□□□□ -0.54
LINC00173-201ENST00000470091 DGUOKQ16854 277 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 TBRG1Q3YBR2 411 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 PABPC1L2AQ5JQF8 200 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 TMEM53Q6P2H8 277 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 UNQ9370/PRO34162Q6UXP9 181 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 FAM57BQ71RH2 274 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
LINC00173-201ENST00000470091 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 OR51A4Q8NGJ6 313 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 TSEN15Q8WW01 171 aaKnown RBP11.69□□□□□ -0.54
LINC00173-201ENST00000470091 SPTSSAQ969W0 71 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 ORAI1Q96D31 301 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 ZNF799Q96GE5 643 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 DERL3Q96Q80 235 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 WACQ9BTA9 647 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 NOX4Q9NPH5 578 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 NUFIP1Q9UHK0 495 aaKnown RBP11.69□□□□□ -0.54
LINC00173-201ENST00000470091 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
LINC00173-201ENST00000470091 TRBV5-7A0A0A0MS05 114 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 PIN1P1O15428 100 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 GATBO75879 557 aaKnown RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 NCR1O76036 304 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 F12P00748 615 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 IL1AP01583 271 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 UCHL1P09936 223 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 ACSM4P0C7M7 580 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 OCM2P0CE71 109 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 UBCP0CG48 685 aaKnown RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 ZNF16P17020 682 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 MYL9P24844 172 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 OTX1P32242 354 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 SLC6A9P48067 706 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 MTNR1BP49286 362 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 CAV3P56539 151 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 HGFACQ04756 655 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 ECH1Q13011 328 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 LSAMPQ13449 338 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 RSPO1Q2MKA7 263 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 MST1LQ2TV78 715 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 KRTAP27-1Q3LI81 207 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 Q499Y3 187 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 PRSS45Q7RTY3 260 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 ELMOD2Q8IZ81 293 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 C17orf78Q8N4C9 275 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 PGAM5Q96HS1 289 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 VRK1Q99986 396 aaPredicted RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 KCNS3Q9BQ31 491 aa11.68□□□□□ -0.54
LINC00173-201ENST00000470091 SLIRPQ9GZT3 109 aaKnown RBP11.68□□□□□ -0.54
LINC00173-201ENST00000470091 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
LINC00173-201ENST00000470091 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 UBL3O95164 117 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 HSD17B12Q53GQ0 312 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 TMEM244Q5VVB8 128 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 IL17RELQ6ZVW7 336 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 NAA40Q86UY6 237 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 BARHL1Q9BZE3 327 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 SHARPINQ9H0F6 387 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 TPK1Q9H3S4 243 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 ZNF319Q9P2F9 582 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 HHLA2Q9UM44 414 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 DHDHQ9UQ10 334 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
LINC00173-201ENST00000470091 TBX1O43435 398 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 LMX1BO60663 402 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 ARL6IP5O75915 188 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 CLPXO76031 633 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 ISG15P05161 165 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 MAPK3P27361 379 aaPredicted RBP11.66□□□□□ -0.54
LINC00173-201ENST00000470091 APEX1P27695 318 aaKnown RBP11.66□□□□□ -0.54
LINC00173-201ENST00000470091 SOX6P35712 828 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 ARR3P36575 388 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 SERPINF1P36955 418 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 PDLIM4P50479 330 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 TPTEP56180 551 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 UBE2NP61088 152 aaKnown RBP11.66□□□□□ -0.54
LINC00173-201ENST00000470091 RAB1AP62820 205 aa11.66□□□□□ -0.54
LINC00173-201ENST00000470091 SRSF2Q01130 221 aaKnown RBP11.66□□□□□ -0.54
LINC00173-201ENST00000470091 SWI5Q1ZZU3 235 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms