RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 A0A087X0M5 115 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 A0A1B0GX30 115 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 MED19A0JLT2 244 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-208ENST00000468300 MBD3L4A6NDZ8 208 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-208ENST00000468300 MBD3L3A6NE82 208 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-208ENST00000468300 MFSD2BA6NFX1 497 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 MBD3L5A6NJ08 208 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-208ENST00000468300 LOC110117498-PIK3R3F6TDL0 507 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 J3QRK9 145 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 UBE2CO00762 179 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 SLC2A1P11166 492 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 CCL1P22362 96 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 PLA2G5P39877 138 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 CX3CR1P49238 355 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 UCNP55089 124 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 IL24Q13007 206 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 C9orf135Q5VTT2 229 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 VWA1Q6PCB0 445 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 STAC2Q6ZMT1 411 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF584Q8IVC4 421 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 MBD3L2Q8NHZ7 208 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-208ENST00000468300 WDFY2Q96P53 400 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 KCNJ15Q99712 375 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 SOSTQ9BQB4 213 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 SLC25A18Q9H1K4 315 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 B3GNT2Q9NY97 397 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 GTF3C1Q12789 2109 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 LOC107986453A0A1B0GWG9 222 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 C5orf51A6NDU8 294 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 P2RY10O00398 339 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 EPXP11678 715 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 FCGR2AP12318 317 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ATF1P18846 271 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 TNFSF8P32971 234 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SOX2P48431 317 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SFRP5Q5T4F7 317 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 FBXW9Q5XUX1 488 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF529Q6P280 563 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SFXN4Q6P4A7 337 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 UNQ6494/PRO21346Q6UXR6 183 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 FAM214BQ7L5A3 538 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CHMP1BQ7LBR1 199 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SELENOHQ8IZQ5 122 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF676Q8N7Q3 588 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 GPR148Q8TDV2 347 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 TNFRSF14Q92956 283 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 TMEM106AQ96A25 262 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 A0A096LPE4 126 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 A0A1W2PPZ6 126 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CRYABP02511 175 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 APOA1P02647 267 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SLC2A2P11168 524 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CFPP27918 469 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 GRB2P62993 217 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 TNK1Q13470 666 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 RAB35Q15286 201 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF79Q15937 498 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF829Q3KNS6 432 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SNAI3Q3KNW1 292 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 HSD17B12Q53GQ0 312 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CRIP3Q6Q6R5 217 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 S100A7AQ86SG5 101 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SNX29P2Q8IUI4 249 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 PARP16Q8N5Y8 322 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 BCL2L2Q92843 193 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SNRNP40Q96DI7 357 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 BOD1Q96IK1 185 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CITED1Q99966 193 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 PRORYQ9H606 182 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ABCB9Q9NP78 766 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 FAM212BQ9NTI7 297 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 POLR1DQ9Y2S0 133 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 AK6Q9Y3D8 172 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 LOC100509620A0A075B734 347 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 A0A1B0GV90 55 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF587BE7ETH6 402 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 HTR3BO95264 441 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 RAB3BP20337 219 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 PRKXP51817 358 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 BEX5Q5H9J7 111 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 BCL2L15Q5TBC7 163 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF585AQ6P3V2 769 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 PAMR1Q6UXH9 720 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CISD2Q8N5K1 135 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 OR1K1Q8NGR3 316 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 GTF3AQ92664 365 aaKnown RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 STARD4Q96DR4 205 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ADAT3Q96EY9 351 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-208ENST00000468300 CCDC120Q96HB5 630 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 COMMD4Q9H0A8 199 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 TUBD1Q9UJT1 453 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 NUP50Q9UKX7 468 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF835Q9Y2P0 537 aa7.19□□□□□ -1.26
BRCA1-208ENST00000468300 SGCEO43556 437 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 RAF1P04049 648 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 ACHEP22303 614 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 APEX1P27695 318 aaKnown RBP7.18□□□□□ -1.26
BRCA1-208ENST00000468300 GALK2Q01415 458 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 FAM166AQ6J272 317 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms