RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 INMTO95050 263 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 CD2P06729 351 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 ADH4P08319 380 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 OCM2P0CE71 109 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 ZNF20P17024 532 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 CA6P23280 308 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 TNFSF4P23510 183 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 TRAM1Q15629 374 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 TSTQ16762 297 aaKnown RBP12.96□□□□□ -0.33
SNIP1-202ENST00000468040 FAM209AQ5JX71 171 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 SYT6Q5T7P8 510 aaPredicted RBP12.96□□□□□ -0.33
SNIP1-202ENST00000468040 Q6ZR03 302 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 OR2Z1Q8NG97 314 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 OR51A4Q8NGJ6 313 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 OR10AC1Q8NH08 325 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 PP6455Q8WZ26 134 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 RGP1Q92546 391 aaPredicted RBP12.96□□□□□ -0.33
SNIP1-202ENST00000468040 MUL1Q969V5 352 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 LURAP1Q96LR2 239 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 VRK1Q99986 396 aaPredicted RBP12.96□□□□□ -0.33
SNIP1-202ENST00000468040 ADAT1Q9BUB4 502 aaKnown RBP12.96□□□□□ -0.33
SNIP1-202ENST00000468040 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
SNIP1-202ENST00000468040 RAB1BQ9H0U4 201 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 NKIRAS2Q9NYR9 191 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 RHBDD3Q9Y3P4 386 aa12.96□□□□□ -0.33
SNIP1-202ENST00000468040 HRNRQ86YZ3 2850 aaPredicted RBP12.96□□□□□ -0.34
SNIP1-202ENST00000468040 DSCAMO60469 2012 aa12.96□□□□□ -0.34
SNIP1-202ENST00000468040 DCHS2Q6V1P9 2916 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 ANXA2P2A6NMY6 339 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 CCRL2O00421 344 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 GATBO75879 557 aaKnown RBP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 SERPINA3P01011 423 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 IGHV1-46P01743 117 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 JUNBP17275 347 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 DNASE1P24855 282 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 MAPK3P27361 379 aaPredicted RBP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 GABRA5P31644 462 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 RPS11P62280 158 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 MZT1Q08AG7 82 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 PRDX4Q13162 271 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 OR8G1Q15617 311 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 Q499Y3 187 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 CLVS2Q5SYC1 327 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 TMEM42Q69YG0 159 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 ZDHHC23Q8IYP9 409 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 SPERTQ8NA61 448 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 PIGCQ92535 297 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 NINJ1Q92982 152 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 FGGYQ96C11 551 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 ELMOD3Q96FG2 381 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 TRMT61AQ96FX7 289 aaKnown RBP12.95□□□□□ -0.34
SNIP1-202ENST00000468040 TECTBQ96PL2 329 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 TMED9Q9BVK6 235 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 CHST5Q9GZS9 411 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
SNIP1-202ENST00000468040 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 ANKRD61A6NGH8 418 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 MLNRO43193 412 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 LMX1BO60663 402 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 NRASP01111 189 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 HLA-DPB1P04440 258 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 CD55P08174 381 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 CDKN1AP38936 164 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 SOX2P48431 317 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 SERPINA12Q8IW75 414 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 ZCCHC24Q8N2G6 241 aaKnown RBP12.94□□□□□ -0.34
SNIP1-202ENST00000468040 PARP16Q8N5Y8 322 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 OR8S1Q8NH09 359 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 UBASH3BQ8TF42 649 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-202ENST00000468040 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 ADAT3Q96EY9 351 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-202ENST00000468040 HIST1H2AAQ96QV6 131 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 EGLN1Q9GZT9 426 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
SNIP1-202ENST00000468040 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
SNIP1-202ENST00000468040 HECTD1Q9ULT8 2610 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 A6NIN4 97 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 ZNF879B4DU55 563 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 PAX1P15863 534 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 SRP9P49458 86 aaKnown RBP12.93□□□□□ -0.34
SNIP1-202ENST00000468040 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
SNIP1-202ENST00000468040 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
SNIP1-202ENST00000468040 TESK1Q15569 626 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 SSX1Q16384 188 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 PLCXD3Q63HM9 321 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 UTS2BQ765I0 119 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 CELF2-AS1Q8N7Q2 184 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 OR5D14Q8NGL3 314 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 OR13C5Q8NGS8 318 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 TMEM203Q969S6 136 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 OR14A2Q96R54 314 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 MICU1Q9BPX6 476 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms