RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 C5orf34Q96MH7 638 aa13.01□□□□□ -0.33
PRPF38B-204ENST00000467302 VDAC3Q9Y277 283 aa13.01□□□□□ -0.33
PRPF38B-204ENST00000467302 RPH3AQ9Y2J0 694 aaPredicted RBP13.01□□□□□ -0.33
PRPF38B-204ENST00000467302 LHFPL6Q9Y693 200 aa13.01□□□□□ -0.33
PRPF38B-204ENST00000467302 COL27A1Q8IZC6 1860 aaPredicted RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 C5orf51A6NDU8 294 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 B4E171 279 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 GSTP1P09211 210 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 CD79AP11912 226 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 TSPAN7P41732 249 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 CYCSP99999 105 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 THEM4Q5T1C6 240 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 BOLLQ8N9W6 283 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 OR10Z1Q8NGY1 313 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 RRNAD1Q96FB5 475 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 C5orf66Q9H5L9 145 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 MOB1AQ9H8S9 216 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 SDHAF3Q9NRP4 125 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 CYTL1Q9NRR1 136 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 ASF1BQ9NVP2 202 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 GPR132Q9UNW8 380 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 C13orf42A0A1B0GVH6 325 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 SHISA8B8ZZ34 492 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 H0YIZ8 118 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 MSX1P28360 303 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 PCOLCEQ15113 449 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 GLIPR1L1Q6UWM5 242 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 NAA40Q86UY6 237 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 ZNF101Q8IZC7 436 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 ARRDC1Q8N5I2 433 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 RHBDD1Q8TEB9 315 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 TMEM230Q96A57 120 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 SPACA5Q96QH8 159 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 SLC39A1Q9NY26 324 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 PPP4R1LQ9P1A2 415 aa13□□□□□ -0.33
PRPF38B-204ENST00000467302 MRPS28Q9Y2Q9 187 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
PRPF38B-204ENST00000467302 VPS13AQ96RL7 3174 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 H3BML4 177 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 SOCS1O15524 211 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 CDC14BO60729 498 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 TPT1P13693 172 aaKnown RBP12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 ABOP16442 354 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 ZNF17P17021 662 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 ZNF20P17024 532 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 ADCYAP1P18509 176 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 TMEM50BP56557 158 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 TMPPEQ6ZT21 453 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 GTPBP8Q8N3Z3 284 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 ZSCAN4Q8NAM6 433 aaPredicted RBP12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 OR10G3Q8NGC4 313 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 DCUN1D4Q92564 292 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 RAB3CQ96E17 227 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 CDC6Q99741 560 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 SOX7Q9BT81 388 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 METTL7AQ9H8H3 244 aa12.99□□□□□ -0.33
PRPF38B-204ENST00000467302 PHF3Q92576 2039 aaKnown RBP12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ZNF878C9JN71 531 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 RAD51DO75771 328 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ACTL6AO96019 429 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 UMODP07911 640 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 PGA4P0DJD7 388 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 PGA3P0DJD8 388 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 LYL1P12980 280 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 P2RY4P51582 365 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 MYBPHQ13203 477 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ACTBL2Q562R1 376 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 SLC25A53Q5H9E4 307 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 C10orf91Q5T1B1 145 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 PUSL1Q8N0Z8 303 aaKnown RBP12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 OR8B12Q8NGG6 310 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 KCNG3Q8TAE7 436 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 RASL10BQ96S79 203 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ZNF319Q9P2F9 582 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 IGHV1-45A0A0A0MS14 117 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 A0A0B4J2A0 478 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 GPR31O00270 319 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 SFT2D2O95562 160 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 MPIG6BO95866 241 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ANOS1P23352 680 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 PTGDSP41222 190 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 OR3A4PP47883 348 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 FLI1Q01543 452 aaPredicted RBP12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 MFAP5Q13361 173 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 EXT1Q16394 746 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 SGCAQ16586 387 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 CCDC157Q569K6 752 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 CLEC18BQ6UXF7 455 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 PEG10Q86TG7 708 aaKnown RBP12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 ARMC10Q8N2F6 343 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 SVBPQ8N300 66 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 OR2Y1Q8NGV0 311 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 SSC4DQ8WTU2 575 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
PRPF38B-204ENST00000467302 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms