RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 S100A13Q99584 98 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 RTN4RQ9BZR6 473 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 TREM2Q9NZC2 230 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 A0A1W2PPE3 182 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 MS4A18H0YCH9 400 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 MPZL1O95297 269 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.21
CHD1L-205ENST00000467213 HOXB5P09067 269 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 HOXA5P20719 270 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 IL12BP29460 328 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 MS4A18Q3C1V0 323 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 WDSUB1Q8N9V3 476 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 OR2I1PQ8NGU4 316 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 CAPNS2Q96L46 248 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 NICN1Q9BSH3 213 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 UCK1Q9HA47 277 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 C14orf166Q9Y224 244 aaKnown RBP13.77□□□□□ -0.21
CHD1L-205ENST00000467213 TMED3Q9Y3Q3 217 aa13.77□□□□□ -0.21
CHD1L-205ENST00000467213 FREM3P0C091 2139 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 BORCS7-ASMTA0A0B4J1R7 106 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 E5RGE8 158 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 AMY2BP19961 511 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 OR3A2P47893 321 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 PPP1CAP62136 330 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 ERV3-1Q14264 604 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 COX15Q7KZN9 410 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 ZNF101Q8IZC7 436 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 AVL9Q8NBF6 648 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 SLC35B3Q9H1N7 401 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 NSG2Q9Y328 171 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 DDAH2O95865 285 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 FOSL2P15408 326 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 ZNF20P17024 532 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 RBMXP38159 391 aaKnown RBP13.76□□□□□ -0.21
CHD1L-205ENST00000467213 P2RY1P47900 373 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 TMEM33P57088 247 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 DEFB110Q30KQ9 67 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 C12orf76Q8N812 135 aaPredicted RBP13.76□□□□□ -0.21
CHD1L-205ENST00000467213 FNDC9Q8TBE3 224 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 PHOSPHO2Q8TCD6 241 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 TMEM234Q8WY98 164 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 ST8SIA1Q92185 356 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 MRPL38Q96DV4 380 aaKnown RBP13.76□□□□□ -0.21
CHD1L-205ENST00000467213 TM2D1Q9BX74 207 aa13.76□□□□□ -0.21
CHD1L-205ENST00000467213 XIRP2A4UGR9 3374 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 SOCS1O15524 211 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 IFNA21P01568 189 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 SULT1A1P50225 295 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 RAB2AP61019 212 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 ZNF296Q8WUU4 475 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-205ENST00000467213 PAPOLGQ9BWT3 736 aaKnown RBP13.75□□□□□ -0.21
CHD1L-205ENST00000467213 TBL1XR1Q9BZK7 514 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 A0A087WWC5 75 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 LOC101059948A0A1B0GTJ6 334 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 A6NLC8 198 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 NPIPA5E9PKD4 350 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 RAD51DO75771 328 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 ZNF239Q16600 458 aaKnown RBP13.75□□□□□ -0.21
CHD1L-205ENST00000467213 IAH1Q2TAA2 248 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-205ENST00000467213 HEPN1Q6WQI6 88 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 H1FNTQ75WM6 255 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-205ENST00000467213 OR13C9Q8NGT0 318 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 MMABQ96EY8 250 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-205ENST00000467213 PLA2G2FQ9BZM2 168 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 BCL2L14Q9BZR8 327 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 OR10A2Q9H208 303 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 BCO1Q9HAY6 547 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 NPIPA1Q9UND3 350 aa13.75□□□□□ -0.21
CHD1L-205ENST00000467213 A0A1W2PNV4 684 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 SUMO3P55854 103 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-205ENST00000467213 S100A10P60903 97 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 HHEXQ03014 270 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 MIDNQ504T8 468 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 FGF14Q92915 247 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 TOLLIPQ9H0E2 274 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 HIPK2Q9H2X6 1198 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 UNKLQ9H9P5 680 aaKnown RBP13.74□□□□□ -0.21
CHD1L-205ENST00000467213 A0A1W2PPH5 198 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 LINC01553A4QN01 128 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 MPIG6BO95866 241 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 SNRNP70P08621 437 aaKnown RBP13.74□□□□□ -0.21
CHD1L-205ENST00000467213 CDX1P47902 265 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-205ENST00000467213 OTPQ5XKR4 325 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 OR2A2Q6IF42 318 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 SLC16A14Q7RTX9 510 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 ZNF441Q8N8Z8 693 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 TMEM104Q8NE00 496 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 OR10H5Q8NGA6 315 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 SPACA1Q9HBV2 294 aa13.74□□□□□ -0.21
CHD1L-205ENST00000467213 ZNF878C9JN71 531 aa13.73□□□□□ -0.21
CHD1L-205ENST00000467213 GPR137BO60478 399 aa13.73□□□□□ -0.21
CHD1L-205ENST00000467213 HOXB2P14652 356 aa13.73□□□□□ -0.21
CHD1L-205ENST00000467213 COL9A1P20849 921 aa13.73□□□□□ -0.21
CHD1L-205ENST00000467213 GLRA1P23415 457 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms