RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 GNALP38405 381 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 EIF1P41567 113 aaKnown RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 HOXA1P49639 335 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 BLOC1S1P78537 153 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 POU3F1Q03052 451 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SPEM2Q0P670 501 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SCRN3Q0VDG4 424 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 PJVKQ0ZLH3 352 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ECH1Q13011 328 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 AIMP2Q13155 320 aaKnown RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OR7A5Q15622 319 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 HMGN3Q15651 99 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 GUCA2BQ16661 112 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 HLA-BQ31612 363 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 RHBDD2Q6NTF9 364 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 POMZP3Q6PJE2 187 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ATRAIDQ6UW56 229 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 FOXL2NBQ6ZUU3 175 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SLC16A14Q7RTX9 510 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 LSRQ86X29 649 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SKA3Q8IX90 412 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OR5AS1Q8N127 324 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 COMMD1Q8N668 190 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 METTL27Q8N6F8 245 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 NOXO1Q8NFA2 376 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OR52N4Q8NGI2 321 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OR10S1Q8NGN2 331 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OR1S2Q8NGQ3 325 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SNIP1Q8TAD8 396 aaKnown RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF501Q96CX3 271 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 RAB3CQ96E17 227 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SEC22AQ96IW7 307 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SMIM8Q96KF7 97 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF75AQ96N20 296 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OXGR1Q96P68 337 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 TM2D1Q9BX74 207 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 TMEM59Q9BXS4 323 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 SELENOIQ9C0D9 397 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OR11A1Q9GZK7 315 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 NRSN2Q9GZP1 204 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 MS4A7Q9GZW8 240 aaPredicted RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF768Q9H5H4 540 aaKnown RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 CYTL1Q9NRR1 136 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 CENPMQ9NSP4 180 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 DECR2Q9NUI1 292 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 DLL3Q9NYJ7 618 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 COQ3Q9NZJ6 369 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 MBD2Q9UBB5 411 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 OSGIN2Q9Y236 505 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 MRPS28Q9Y2Q9 187 aaKnown RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 HDGFL3Q9Y3E1 203 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 PCDHGA1Q9Y5H4 931 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 LHFPL6Q9Y693 200 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ASCC3Q8N3C0 2202 aaKnown RBP5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 ASXL3Q9C0F0 2248 aa5.42□□□□□ -1.54
UBQLN4-202ENST00000459954 TNRC6BQ9UPQ9 1833 aaKnown RBP5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 DMXL1Q9Y485 3027 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 A0A087WZY1 265 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 IGKV1D-43A0A0B4J1Z2 117 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 CDC14CA4D256 554 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 C5orf51A6NDU8 294 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 DHRS7CA6NNS2 312 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 CDX4O14627 284 aaPredicted RBP5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 TRAF3IP2O43734 574 aaPredicted RBP5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PRKNO60260 465 aaPredicted RBP5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PIAS2O75928 621 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 CSTBP04080 98 aaKnown RBP5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PGA4P0DJD7 388 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PGA3P0DJD8 388 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 ICAM2P13598 275 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 FOLR2P14207 255 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PGAM2P15259 253 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PNLIPP16233 465 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 AKR1C4P17516 323 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 VAMP1P23763 118 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 MAOBP27338 520 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 P2RY4P51582 365 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF41P51814 821 aaPredicted RBP5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 EFNA3P52797 238 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 BIDP55957 195 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 TMEM50BP56557 158 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 CLRN1P58418 232 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 HIST1H3AP68431 136 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 GABREP78334 506 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 S100A12P80511 92 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 DEFA5Q01523 94 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 ACY1Q03154 408 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 FMODQ06828 376 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 SGCAQ16586 387 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 PLPPR5Q32ZL2 321 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 HIST2H3PS2Q5TEC6 136 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 OR10K2Q6IF99 312 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 GLIPR1L1Q6UWM5 242 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 HIST2H3AQ71DI3 136 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 RAB11FIP2Q7L804 512 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 ANKRD37Q7Z713 158 aa5.41□□□□□ -1.54
UBQLN4-202ENST00000459954 LINC00346Q8IVM7 164 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms