RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 LIPAP38571 399 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 RAB39AQ14964 217 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 USF2Q15853 346 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 SMIM15Q7Z3B0 74 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 OR2T27Q8NH04 317 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 NAA50Q9GZZ1 169 aaKnown RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 NELFAQ9H3P2 528 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 ZNF224Q9NZL3 707 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 GDF2Q9UK05 429 aaPredicted RBP9.01□□□□□ -0.97
USP39-210ENST00000459775 GNG8Q9UK08 70 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 IKZF2Q9UKS7 526 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
USP39-210ENST00000459775 MYL12BO14950 172 aa9□□□□□ -0.97
USP39-210ENST00000459775 MED6O75586 246 aa9□□□□□ -0.97
USP39-210ENST00000459775 RAD51DO75771 328 aa9□□□□□ -0.97
USP39-210ENST00000459775 MSR1P21757 451 aa9□□□□□ -0.97
USP39-210ENST00000459775 TIMP3P35625 211 aa9□□□□□ -0.97
USP39-210ENST00000459775 ARL3P36405 182 aa9□□□□□ -0.97
USP39-210ENST00000459775 ZNF84P51523 738 aa9□□□□□ -0.97
USP39-210ENST00000459775 RBPJQ06330 500 aa9□□□□□ -0.97
USP39-210ENST00000459775 POU4F2Q12837 409 aa9□□□□□ -0.97
USP39-210ENST00000459775 CDSNQ15517 529 aa9□□□□□ -0.97
USP39-210ENST00000459775 ESCO2Q56NI9 601 aa9□□□□□ -0.97
USP39-210ENST00000459775 OR2A2Q6IF42 318 aa9□□□□□ -0.97
USP39-210ENST00000459775 SLC18B1Q6NT16 456 aa9□□□□□ -0.97
USP39-210ENST00000459775 ZNF474Q6S9Z5 364 aaPredicted RBP9□□□□□ -0.97
USP39-210ENST00000459775 SLC22A24Q8N4F4 322 aa9□□□□□ -0.97
USP39-210ENST00000459775 OR6K3Q8NGY3 331 aa9□□□□□ -0.97
USP39-210ENST00000459775 SNX33Q8WV41 574 aa9□□□□□ -0.97
USP39-210ENST00000459775 ABHD1Q96SE0 405 aa9□□□□□ -0.97
USP39-210ENST00000459775 C1QTNF6Q9BXI9 259 aa9□□□□□ -0.97
USP39-210ENST00000459775 LINC00470Q9BZP3 86 aa9□□□□□ -0.97
USP39-210ENST00000459775 B3GAT2Q9NPZ5 323 aa9□□□□□ -0.97
USP39-210ENST00000459775 NAGKQ9UJ70 344 aa9□□□□□ -0.97
USP39-210ENST00000459775 POU2F3Q9UKI9 436 aa9□□□□□ -0.97
USP39-210ENST00000459775 SLC5A6Q9Y289 635 aa9□□□□□ -0.97
USP39-210ENST00000459775 EXOSC1Q9Y3B2 195 aaKnown RBP9□□□□□ -0.97
USP39-210ENST00000459775 CACNA1CQ13936 2221 aa9□□□□□ -0.97
USP39-210ENST00000459775 POLEQ07864 2286 aa9□□□□□ -0.97
USP39-210ENST00000459775 C5orf63A6NC05 138 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF99A8MXY4 864 aaPredicted RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 EEF1E1-BLOC1S5C9J1V9 151 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF701M0R085 212 aaPredicted RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 CCL21O00585 134 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 EEF1E1O43324 174 aaKnown RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 IGHV2-70P01814 119 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 GNLYP22749 145 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 PTGER4P35408 488 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ATP5IP56385 69 aaPredicted RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 MRPS34P82930 218 aaKnown RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 ACSM1Q08AH1 577 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 SNTB1Q13884 538 aaKnown RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 SPHARQ15513 63 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ODF4Q2M2E3 257 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ARMCX4Q5H9R4 360 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF684Q5T5D7 378 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 FOXL2NBQ6ZUU3 175 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 NAA40Q86UY6 237 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 CXorf67Q86X51 503 aaPredicted RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 LRRC20Q8TCA0 184 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 RORBQ92753 470 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 FBXW5Q969U6 566 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 SPSB4Q96A44 273 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 PELI1Q96FA3 418 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 MGLLQ99685 303 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ELOVL3Q9HB03 270 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 GP6Q9HCN6 339 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 C14orf119Q9NWQ9 140 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 PROCRQ9UNN8 238 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 MEMO1Q9Y316 297 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 A0A1B0GV90 55 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF670-ZNF695F2Z2N8 137 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 H3BSA7 217 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 DBHP09172 617 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 FBP1P09467 338 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 LINC00614P0C842 121 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 SMIM6P0DI80 62 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 CCL2P13500 99 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF32P17041 273 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 SRMP19623 302 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 GCH1P30793 250 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 CA7P43166 264 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 RPL5P46777 297 aaKnown RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 WNT4P56705 351 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 NANOS3P60323 173 aaKnown RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 GALK2Q01415 458 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF45Q02386 682 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 INSL4Q14641 139 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 PCK2Q16822 640 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 FAM27BQ5VT28 67 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 UBE2UQ5VVX9 321 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 LIPKQ5VXJ0 399 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 ZNF774Q6NX45 483 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 GABRG1Q8N1C3 465 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 TMEM203Q969S6 136 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms