RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SH3GL1Q99961 368 aa13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 DNTTIP1Q9H147 329 aa13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 FN3KQ9H479 309 aa13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 ELL3Q9HB65 397 aaPredicted RBP13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 SLC25A10Q9UBX3 287 aaPredicted RBP13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 ZNF391Q9UJN7 358 aa13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 RAB21Q9UL25 225 aa13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 TMEM5Q9Y2B1 443 aa13.88□□□□□ -0.19
UBE2D4-209ENST00000454428 A0A1W2PQ09 198 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 A0A1W2PRX2 142 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 CDIPTO14735 213 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 SLC2A1P11166 492 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 GRK5P34947 590 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 CAV3P56539 151 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 GMFBP60983 142 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 CD83Q01151 205 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 DRAM2Q6UX65 266 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 DYNAPQ8N1N2 210 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 DTX3Q8N9I9 347 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 OR8S1Q8NH09 359 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 ANGPTL6Q8NI99 470 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 LZICQ8WZA0 190 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 ERMAPQ96PL5 475 aaPredicted RBP13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 TMBIM4Q9HC24 238 aa13.87□□□□□ -0.19
UBE2D4-209ENST00000454428 STARD9Q9P2P6 4700 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 OR6C68A6NDL8 312 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 HIST1H1CP16403 213 aaKnown RBP13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 RAB13P51153 203 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 FAM3AP98173 230 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 TMEM95Q3KNT9 176 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 TCTEX1D4Q5JR98 221 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 MKXQ8IYA7 352 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 C11orf42Q8N5U0 333 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 OR5D13Q8NGL4 314 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 ANKRD19PQ9H560 264 aa13.86□□□□□ -0.19
UBE2D4-209ENST00000454428 A6NDX4 124 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 VGLL3A8MV65 326 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 H0YAE9 185 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 SIGLEC5O15389 551 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 ACAA1P09110 424 aaPredicted RBP13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 FAHP16930 419 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 NDUFB7P17568 137 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 NAA10P41227 235 aaPredicted RBP13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 GSK3BP49841 420 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 SEC23BQ15437 767 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 KLHL12Q53G59 568 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 SMARCD3Q6STE5 483 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 RRM2BQ7LG56 351 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 TMEM219Q86XT9 240 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 OR2T12Q8NG77 320 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 OR4K13Q8NH42 304 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 ZNRF4Q8WWF5 429 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 RCC1LQ96I51 464 aaKnown RBP13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 INPP5EQ9NRR6 644 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 TCF19Q9Y242 345 aa13.85□□□□□ -0.19
UBE2D4-209ENST00000454428 HYDINQ4G0P3 5121 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 UNC119BA6NIH7 251 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 NKX6-3A6NJ46 265 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 FAM90A8PA6NJQ4 464 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 ANKRD30BLA7E2S9 258 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 ARPC3O15145 178 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 TIPRLO75663 272 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 TROVE2P10155 538 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 DDOSTP39656 456 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 PRKXP51817 358 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 ERVFRD-1P60508 538 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 SLC35A2P78381 396 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 BLMHQ13867 455 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 CNN3Q15417 329 aaKnown RBP13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 IFI44LQ53G44 452 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 LYPD4Q6UWN0 246 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 SLC16A9Q7RTY1 509 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 MED30Q96HR3 178 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 TMEM120AQ9BXJ8 343 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 FGF23Q9GZV9 251 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 OPA3Q9H6K4 179 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 C19orf12Q9NSK7 152 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 CSMD3Q7Z407 3707 aa13.84□□□□□ -0.19
UBE2D4-209ENST00000454428 IGKV1D-17A0A075B6S4 117 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 TRBV4-1A0A0J9YWV2 114 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 A0A1W2PRQ8 180 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 RENP00797 406 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 HLA-DQA2P01906 255 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 POU1F1P28069 291 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 NOS3P29474 1203 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 BLCAPP62952 87 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 DGCR6Q14129 220 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 PLA1AQ53H76 456 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 CBLL1Q75N03 491 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 ZDHHC21Q8IVQ6 265 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 ZNRF1Q8ND25 227 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 SDR9C7Q8NEX9 313 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 OR10Z1Q8NGY1 313 aa13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 RPL3LQ92901 407 aaKnown RBP13.83□□□□□ -0.2
UBE2D4-209ENST00000454428 SGK3Q96BR1 496 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms