RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MOGAT2Q3SYC2 334 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 MIDNQ504T8 468 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ZDHHC23Q8IYP9 409 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 SLC38A6Q8IZM9 456 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 EDARADDQ8WWZ3 215 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 PELI1Q96FA3 418 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 BOD1Q96IK1 185 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CHST6Q9GZX3 395 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CCDC187A0A096LP49 1063 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 XKRY2A2RUG3 117 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 MASP2O00187 686 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 GLRA1P23415 457 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 HAAOP46952 286 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 NOVA1P51513 510 aaKnown RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 AGFG1P52594 562 aaKnown RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 DHRS2Q13268 280 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 SHHQ15465 462 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 MPPED2Q15777 294 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 OR52N4Q8NGI2 321 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 TWSG1Q9GZX9 223 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 HDGFL3Q9Y3E1 203 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 WSB1Q9Y6I7 421 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 TRAV20A0A0B4J274 112 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 LINC01553A4QN01 128 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 DBX1A6NMT0 343 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CXCL13O43927 109 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 GP1BAP07359 652 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 GLB1P16278 677 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CAPZBP47756 277 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 HMGA2P52926 109 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 SLC25A1P53007 311 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 SUMO3P55854 103 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 PPP1CBP62140 327 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF687Q8N1G0 1237 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ATOH1Q92858 354 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ERGIC1Q969X5 290 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 PHYHIPLQ96FC7 376 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 UCK1Q9HA47 277 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF230Q9UIE0 474 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 LRP12Q9Y561 859 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CLDN34H7C241 214 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 TBX19O60806 448 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 YIF1AO95070 293 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 FAHP16930 419 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 SCAND1P57086 179 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 B4GALNT1Q00973 533 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 KIAA0040Q15053 153 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 GSG1Q2KHT4 349 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CDONQ4KMG0 1287 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF66Q6ZN08 573 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 DGAT2L6Q6ZPD8 337 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 MUC20Q8N307 709 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 NTNG2Q96CW9 530 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 THOC3Q96J01 351 aaKnown RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 EDEM2Q9BV94 578 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 MMP17Q9ULZ9 603 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 KCNE3Q9Y6H6 103 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 CBY3A6NI87 242 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 FIGNL2A6NMB9 653 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PRKNO60260 465 aaPredicted RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 TOX4O94842 621 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PTHLHP12272 177 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF17P17021 662 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 FUT6P51993 359 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 WNT3P56703 355 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 IQCJQ1A5X6 159 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 COL13A1Q5TAT6 717 aaPredicted RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 TSEN54Q7Z6J9 526 aaKnown RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 CCL4L1Q8NHW4 92 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 TTC9Q92623 222 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 TAAR6Q96RI8 345 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 FBXO34Q9NWN3 711 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 SIT1Q9Y3P8 196 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 MMP24Q9Y5R2 645 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 A0A0B4J2E0 115 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 A0A1B0GX12 115 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 TERTO14746 1132 aaKnown RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 ZFPL1O95159 310 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PEX11BO96011 259 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 FABP4P15090 132 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 FUT3P21217 361 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 SNRPEP62304 92 aaKnown RBP7□□□□□ -1.29
NEDD9-204ENST00000448183 PARM1Q6UWI2 310 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 RNF165Q6ZSG1 346 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 M1APQ8TC57 530 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 NT5CQ8TCD5 201 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 ELSPBP1Q96BH3 223 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 NDFIP1Q9BT67 221 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 NARFLQ9H6Q4 476 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 TMED3Q9Y3Q3 217 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 ANKRD36CQ5JPF3 1778 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 IGHV3-64DA0A0J9YX35 117 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PPM1DO15297 605 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 LRP5O75197 1615 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 CEACAM5P06731 702 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 FBP1P09467 338 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 SULT1A3P0DMM9 295 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 SULT1A4P0DMN0 295 aa7□□□□□ -1.29
NEDD9-204ENST00000448183 PCMT1P22061 227 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms