RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ADH4P08319 380 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 FAHP16930 419 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 MSMPQ1L6U9 139 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 HSD17B12Q53GQ0 312 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 GPR107Q5VW38 600 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 ZNF529Q6P280 563 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 SATL1Q86VE3 508 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 SPERTQ8NA61 448 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 OR13G1Q8NGZ3 307 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 RAB2BQ8WUD1 216 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 ADAT3Q96EY9 351 aaPredicted RBP10.85□□□□□ -0.67
SCLT1-202ENST00000439369 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 SLC30A2Q9BRI3 323 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 SOX7Q9BT81 388 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 SLITRK2Q9H156 845 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 OR51E2Q9H255 320 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 TXNL4BQ9NX01 149 aaKnown RBP10.85□□□□□ -0.67
SCLT1-202ENST00000439369 DUSP13Q9UII6 198 aa10.85□□□□□ -0.67
SCLT1-202ENST00000439369 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 A0A1W2PPW3 197 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 ANKRD61A6NGH8 418 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 NOL3O60936 208 aaKnown RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 NRASP01111 189 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 ERCC1P07992 297 aaPredicted RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 BMP4P12644 408 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 SSTR2P30874 369 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 SOX2P48431 317 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 MMP15P51511 669 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 PPP3R1P63098 170 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 MZT1Q08AG7 82 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 CNN3Q15417 329 aaKnown RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 C20orf204Q6ZNR8 217 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 SLC16A12Q6ZSM3 486 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 DTX2Q86UW9 622 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 CDH26Q8IXH8 852 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 MUC15Q8N387 334 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 DNAAF1Q8NEP3 725 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 NEUROG1Q92886 237 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 SPSB1Q96BD6 273 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 CPNE2Q96FN4 548 aaPredicted RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 KCTD7Q96MP8 289 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 SYT3Q9BQG1 590 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 CHCHD6Q9BRQ6 235 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 ZCCHC4Q9H5U6 513 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 EXOSC4Q9NPD3 245 aaKnown RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 NOX4Q9NPH5 578 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 SNTG1Q9NSN8 517 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 TMEM100Q9NV29 134 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 TAAR3PQ9P1P4 343 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 ZDHHC8Q9ULC8 765 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 RHBDD3Q9Y3P4 386 aa10.84□□□□□ -0.67
SCLT1-202ENST00000439369 HEATR1Q9H583 2144 aaKnown RBP10.84□□□□□ -0.67
SCLT1-202ENST00000439369 LRRK2Q5S007 2527 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 RTTNQ86VV8 2226 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 MEGF11A6BM72 1044 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 OR5B21A6NL26 309 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 ANXA2P2A6NMY6 339 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 M0R233 179 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 PIN1P1O15428 100 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 SULT1B1O43704 296 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 LMX1BO60663 402 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 ALDOBP05062 364 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 IGFBP3P17936 291 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-202ENST00000439369 RAB3AP20336 220 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 PRKACBP22694 351 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 MYL9P24844 172 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 MTNR1BP49286 362 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 PSMD7P51665 324 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 SNRPD2P62316 118 aaKnown RBP10.83□□□□□ -0.68
SCLT1-202ENST00000439369 PRDX4Q13162 271 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 NKPD1Q17RQ9 610 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 SWI5Q1ZZU3 235 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 TMEM255AQ5JRV8 349 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 FAM209AQ5JX71 171 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 C22orf42Q6IC83 251 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 LRP11Q86VZ4 500 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 TPRA1Q86W33 373 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 CLVS1Q8IUQ0 354 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-202ENST00000439369 ZDHHC23Q8IYP9 409 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 CELF2-AS1Q8N7Q2 184 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 NKAIN3Q8N8D7 197 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 OR5A2Q8NGI9 324 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 HIST1H2AAQ96QV6 131 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 PAPOLGQ9BWT3 736 aaKnown RBP10.83□□□□□ -0.68
SCLT1-202ENST00000439369 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
SCLT1-202ENST00000439369 CLEC4MQ9H2X3 399 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-202ENST00000439369 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 TCF7L1Q9HCS4 588 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 TMEM138Q9NPI0 162 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 CBLN4Q9NTU7 201 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 NKIRAS2Q9NYR9 191 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 FZR1Q9UM11 496 aa10.83□□□□□ -0.68
SCLT1-202ENST00000439369 LOC100506127A0A0U1RQW1 187 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 PDCD5O14737 125 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 SLC22A1O15245 554 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 DANCRP0C864 163 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 ATF1P18846 271 aa10.82□□□□□ -0.68
SCLT1-202ENST00000439369 SRMP19623 302 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms