RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 OR5H2Q8NGV7 314 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 FAM213BQ8TBF2 198 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 TCEAL7Q9BRU2 100 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 KCNJ16Q9NPI9 418 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 TMEM184BQ9Y519 407 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-204ENST00000438964 ARHGAP21Q5T5U3 1957 aa11.87□□□□□ -0.51
ACTN1-204ENST00000438964 IGKV1D-8A0A087WSZ0 117 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 ADAM10O14672 748 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 NXPH3O95157 252 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 SLC34A2O95436 690 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 CXCL1P09341 107 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 H2BFMP0C1H6 154 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF823P16415 610 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 OMGP23515 440 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 GJA4P35212 333 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 SNCAP37840 140 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 POC1AQ8NBT0 407 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 TOMM40LQ969M1 308 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 MMABQ96EY8 250 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 RPP25Q9BUL9 199 aaKnown RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 WFDC1Q9HC57 220 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 PRTFDC1Q9NRG1 225 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 TGIF2-C20orf24A0A0A6YYL0 155 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 IGLV1-36A0A0B4J1U3 117 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 H0YL77 283 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 FABP4P15090 132 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 CASP6P55212 293 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 TMEM50BP56557 158 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 RSU1Q15404 277 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 HAGHQ16775 308 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 NSUN5P2Q63ZY6 315 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 PLXDC2Q6UX71 529 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 UBAC2Q8NBM4 344 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 VSX1Q9NZR4 365 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 RHBDD3Q9Y3P4 386 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 DMRT1Q9Y5R6 373 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 DIDO1Q9BTC0 2240 aaKnown RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 LINC01553A4QN01 128 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 PNMTP11086 282 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 PTGER4P35408 488 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 GPR3P46089 330 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 RAB38P57729 211 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 RPL27P61353 136 aaKnown RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 RPS21P63220 83 aaKnown RBP11.86□□□□□ -0.51
ACTN1-204ENST00000438964 NHLH2Q02577 135 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 PCK2Q16822 640 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 ISXQ2M1V0 245 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 BRICD5Q6PL45 260 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 SLC43A2Q8N370 569 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 SLC22A18Q96BI1 424 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 GNRHR2Q96P88 292 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 CDC6Q99741 560 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 POLE3Q9NRF9 147 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 R4GMQ9 66 aa11.86□□□□□ -0.51
ACTN1-204ENST00000438964 URB1O60287 2271 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 C17orf105B2RV13 164 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF878C9JN71 531 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 SOD3P08294 240 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 HCKP08631 526 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 GIMD1P0DJR0 217 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 RAP1AP62834 184 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 TANGO2Q6ICL3 276 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 TMEM156Q8N614 296 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 BAHD1Q8TBE0 780 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 COL6A3P12111 3177 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 NBEAQ8NFP9 2946 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF726A6NNF4 738 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 TMEM127O75204 238 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 SNRPCP09234 159 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 CD37P11049 281 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 SLC6A9P48067 706 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 KIR2DS3Q14952 304 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 C21orf62-AS1Q17RA5 79 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 AADACL3Q5VUY0 350 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 RPUSD3Q6P087 351 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 CPEB2Q7Z5Q1 589 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 NELFAQ9H3P2 528 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 PRDM13Q9H4Q3 707 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 GAR1Q9NY12 217 aaKnown RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF581Q9P0T4 197 aa11.85□□□□□ -0.51
ACTN1-204ENST00000438964 THAP10Q9P2Z0 257 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-204ENST00000438964 FAM221AA4D161 298 aa11.84□□□□□ -0.51
ACTN1-204ENST00000438964 C5orf63A6NC05 138 aa11.84□□□□□ -0.51
ACTN1-204ENST00000438964 NUDT19A8MXV4 375 aa11.84□□□□□ -0.51
ACTN1-204ENST00000438964 MASP2O00187 686 aa11.84□□□□□ -0.51
ACTN1-204ENST00000438964 CST4P01036 141 aa11.84□□□□□ -0.51
ACTN1-204ENST00000438964 CDAP32320 146 aa11.84□□□□□ -0.51
ACTN1-204ENST00000438964 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms