RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 MTRF1O75570 445 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 RPP14O95059 124 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 FSTL3O95633 263 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 CYB5R3P00387 301 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 CST4P01036 141 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 IGLV3-1P01715 115 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 IGHV2-5P01817 119 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 TTRP02766 147 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 ACKR3P25106 362 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 MDH2P40926 338 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF85Q03923 595 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 TMEM155Q4W5P6 130 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF691Q5VV52 312 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 PRAMEF6Q5VXH4 476 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 KCTD20Q7Z5Y7 419 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 ELMOD2Q8IZ81 293 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 MUC20Q8N307 709 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 KLHL36Q8N4N3 616 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 SETD9Q8NE22 299 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 LGALS12Q96DT0 336 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 FAM71F1Q96KD3 344 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 G6PC2Q9NQR9 355 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 UFSP2Q9NUQ7 469 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 RPL36Q9Y3U8 105 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF816-ZNF321PA0A0X1KG74 233 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 FAM20BO75063 409 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 FADS2O95864 444 aaKnown RBP15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 ACTA2P62736 377 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 ACTG2P63267 376 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 SLC34A1Q06495 639 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 RAB40BQ12829 278 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 HNRNPA0Q13151 305 aaKnown RBP15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 IL18R1Q13478 541 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 ZMYND11Q15326 602 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 MPPED2Q15777 294 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 ZBTB37Q5TC79 503 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 LRRC28Q86X40 367 aaPredicted RBP15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 SEMA6DQ8NFY4 1073 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 OR51F2Q8NH61 342 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 APH1BQ8WW43 257 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 MICU1Q9BPX6 476 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 UBAP1Q9NZ09 502 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 GNG8Q9UK08 70 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 PCDHB10Q9UN67 800 aa15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 SONP18583 2426 aaKnown RBP15.15■□□□□ 0.02
SEMA3B-201ENST00000416295 DYSFO75923 2080 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 A6NLC8 198 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 H0YAE9 185 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 CRLF1O75462 422 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 DHRS3O75911 302 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 GRPP07492 148 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 MSMBP08118 114 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 PCMT1P22061 227 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 PMELP40967 661 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 DVL1P1P54792 670 aaPredicted RBP15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 ISL1P61371 349 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 ADARB1P78563 741 aaKnown RBP15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 RIPPLY1Q0D2K3 151 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 PRDX4Q13162 271 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 CDONQ4KMG0 1287 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 TP53I3Q53FA7 332 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 THAP5Q7Z6K1 395 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 GLCCI1Q86VQ1 547 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 CATSPERDQ86XM0 798 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 PRIMA1Q86XR5 153 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 ZDHHC23Q8IYP9 409 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 PIGCQ92535 297 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 RORBQ92753 470 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 PPP1R14AQ96A00 147 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 ITPKCQ96DU7 683 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 ADI1Q9BV57 179 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 RTL8AQ9BWD3 113 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 RNPEPL1Q9HAU8 725 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 AMBNQ9NP70 447 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 INPP5EQ9NRR6 644 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 ACOXLQ9NUZ1 547 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 RNF7Q9UBF6 113 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 CDC42EP3Q9UKI2 254 aa15.14■□□□□ 0.01
SEMA3B-201ENST00000416295 YLPM1P49750 1951 aaKnown RBP15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 PPIAL4EA0A075B759 164 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 DHRS7CA6NNS2 312 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF850A8MQ14 1090 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 FAM157AC9JC47 383 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 PPIAL4DF5H284 164 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 H0YHG0 523 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 WBP4O75554 376 aaKnown RBP15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 CLIC3O95833 236 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 PPIAL4FP0DN26 164 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 KLHL22Q53GT1 634 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 DOK3Q7L591 496 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 KRT74Q7RTS7 529 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 EGFL6Q8IUX8 553 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 HIST1H2AAQ96QV6 131 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 MRPS18AQ9NVS2 196 aaKnown RBP15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 C1orf123Q9NWV4 160 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 LPAR3Q9UBY5 353 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 NKX1-2Q9UD57 310 aaPredicted RBP15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 ENPP5Q9UJA9 477 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 PPIAL4AQ9Y536 164 aa15.13■□□□□ 0.01
SEMA3B-201ENST00000416295 HSPE1-MOB4S4R3N1 261 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms