RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 AP3S2P59780 193 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PITPNAQ00169 270 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 FLI1Q01543 452 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SEMG2Q02383 582 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC10A7Q0GE19 358 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 C2orf80Q0P641 193 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SCRN3Q0VDG4 424 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SERTAD2Q14140 314 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRAM2Q15035 370 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PTGES3Q15185 160 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 RGNQ15493 299 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 LINC01620Q4KN68 170 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MS4A13Q5J8X5 152 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPRC6AQ5T6X5 926 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 FAM46CQ5VWP2 391 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 KHDRBS2Q5VWX1 349 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF770Q6IQ21 691 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 RHBDD2Q6NTF9 364 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 NOXRED1Q6NXP6 359 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 KCNIP4Q6PIL6 250 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CLEC18BQ6UXF7 455 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 VITQ6UXI7 678 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CASP12Q6UXS9 341 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TFAP2EQ6VUC0 442 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PGAP1Q75T13 922 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 STPG2Q8N412 459 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC37A3Q8NCC5 494 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TMEM104Q8NE00 496 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR4K2Q8NGD2 314 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR5AP2Q8NGF4 316 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR9G4Q8NGQ1 327 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR13C4Q8NGS5 318 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR52N1Q8NH53 320 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR6X1Q8NH79 312 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPPL2AQ8TCT8 520 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPRYD4Q8WW59 207 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 RBPMSQ93062 196 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PSMG2Q969U7 264 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 SGTBQ96EQ0 304 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PACRGQ96M98 296 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR5M11Q96RB7 305 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CABLES2Q9BTV7 478 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 CLEC7AQ9BXN2 247 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF436Q9C0F3 470 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MIXL1Q9H2W2 232 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 LRRN3Q9H3W5 708 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANKRD19PQ9H560 264 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZDHHC6Q9H6R6 413 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 HEXA-AS1Q9H8Q6 139 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TPT1P8Q9HAU6 139 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 LPAR2Q9HBW0 351 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MCCC2Q9HCC0 563 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR2S2Q9NQN1 319 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPR173Q9NS66 373 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ACER3Q9NUN7 267 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 EXD2Q9NVH0 621 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 IL17CQ9P0M4 197 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 PIPOXQ9P0Z9 390 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 P2RX2Q9UBL9 471 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 VPS29Q9UBQ0 182 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MGAT4AQ9UM21 535 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANGPT4Q9Y264 503 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 Q9Y3F1 56 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 TBL2Q9Y4P3 447 aaKnown RBP3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 ARL5AQ9Y689 179 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 URGCP-MRPS24S4R325 110 aa3.09□□□□□ -1.91
HMGB3P23-201ENST00000414981 MIA3Q5JRA6 1907 aa3.09□□□□□ -1.92
HMGB3P23-201ENST00000414981 A0A1W2PPE3 182 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PQLC2LA1A4F0 135 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR51F1A6NGY5 319 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 HMSDA8MTL9 139 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 MPTX1A8MV57 137 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 A8MX80 341 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 LOC730098B7Z3J9 87 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM238C9JI98 176 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NEDD8-MDP1E9PL57 170 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PDHXO00330 501 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TAPBPO15533 448 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 FABP7O15540 132 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 PI15O43692 258 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 GSTZ1O43708 216 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 RAD1O60671 282 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 ENTPD6O75354 484 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CLDN11O75508 207 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 REM1O75628 298 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDRT1O95170 752 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SYNGR4O95473 234 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 LDOC1O95751 146 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SOD1P00441 154 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 CST4P01036 141 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 IFNW1P05000 195 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 SERPIND1P05546 499 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 GP1BAP07359 652 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 HBQ1P09105 142 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 HIST1H2AGP0C0S8 130 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 HAPLN1P10915 354 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 RAB4AP20338 218 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 NPR2P20594 1047 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR1E1P30953 314 aa3.08□□□□□ -1.92
HMGB3P23-201ENST00000414981 TGFBR1P36897 503 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms