RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PIGCQ92535 297 aa11.2□□□□□ -0.62
CNOT4-204ENST00000414802 NRGNQ92686 78 aa11.2□□□□□ -0.62
CNOT4-204ENST00000414802 YIPF6Q96EC8 236 aa11.2□□□□□ -0.62
CNOT4-204ENST00000414802 PLEKHF2Q9H8W4 249 aa11.2□□□□□ -0.62
CNOT4-204ENST00000414802 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
CNOT4-204ENST00000414802 GPR173Q9NS66 373 aa11.2□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF275Q9NSD4 429 aaPredicted RBP11.2□□□□□ -0.62
CNOT4-204ENST00000414802 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF850A8MQ14 1090 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF879B4DU55 563 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 H0YL77 283 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 HLA-DPB1P04440 258 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 NAT2P11245 290 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 PRF1P14222 555 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 CA6P23280 308 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 RPL5P46777 297 aaKnown RBP11.19□□□□□ -0.62
CNOT4-204ENST00000414802 SELENOVP59797 346 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 PRDX4Q13162 271 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ACSM3Q53FZ2 586 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ASPHD2Q6ICH7 369 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 SATL1Q86VE3 508 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ZCCHC24Q8N2G6 241 aaKnown RBP11.19□□□□□ -0.62
CNOT4-204ENST00000414802 MS4A15Q8N5U1 240 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF611Q8N823 705 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 OR8G5Q8NG78 346 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 NPRL2Q8WTW4 380 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 RPL3LQ92901 407 aaKnown RBP11.19□□□□□ -0.62
CNOT4-204ENST00000414802 TMEM106AQ96A25 262 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 C14orf79Q96F83 325 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 DERL3Q96Q80 235 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 CHCHD6Q9BRQ6 235 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 DYNLRB1Q9NP97 96 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 NOX4Q9NPH5 578 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 TAS2R4Q9NYW5 299 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 ENPP5Q9UJA9 477 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 LAMP3Q9UQV4 416 aa11.19□□□□□ -0.62
CNOT4-204ENST00000414802 LOC100506127A0A0U1RQW1 187 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 ANKRD30BLA7E2S9 258 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 B9A039 149 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 PIN1P1O15428 100 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 MLNRO43193 412 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 GPX5O75715 221 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 CD8AP01732 235 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 DANCRP0C864 163 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF12P17014 697 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 CD53P19397 219 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 CRYBB2P43320 205 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 MMP15P51511 669 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 EFNB3Q15768 340 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 ZMAT1Q5H9K5 638 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 CEP78Q5JTW2 689 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 PLCXD3Q63HM9 321 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 CEACAM19Q7Z692 300 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 CSNK2A3Q8NEV1 391 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 OR13C9Q8NGT0 318 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 UBASH3BQ8TF42 649 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 ADAT1Q9BUB4 502 aaKnown RBP11.18□□□□□ -0.62
CNOT4-204ENST00000414802 FUNDC2Q9BWH2 189 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 NAA50Q9GZZ1 169 aaKnown RBP11.18□□□□□ -0.62
CNOT4-204ENST00000414802 PPIL3Q9H2H8 161 aaKnown RBP11.18□□□□□ -0.62
CNOT4-204ENST00000414802 TPK1Q9H3S4 243 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 RNF167Q9H6Y7 350 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 STUB1Q9UNE7 303 aa11.18□□□□□ -0.62
CNOT4-204ENST00000414802 TRBV5-7A0A0A0MS05 114 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 PLSCR5A0PG75 271 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 DHRS7CA6NNS2 312 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 M0R233 179 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SPRY3O43610 288 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SC5DO75845 299 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 CD2P06729 351 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SSTR2P30874 369 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 TGFBR1P36897 503 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 DDOSTP39656 456 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 LSM3P62310 102 aaKnown RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SNRPD2P62316 118 aaKnown RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 TRAM1Q15629 374 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SWI5Q1ZZU3 235 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 GPR107Q5VW38 600 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 MOB3CQ70IA8 216 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 CCDC54Q8NEL0 328 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SLC30A2Q9BRI3 323 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 TRAF4Q9BUZ4 470 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 FGF23Q9GZV9 251 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 LIME1Q9H400 295 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 CBLN4Q9NTU7 201 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 FAIMQ9NVQ4 179 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 MRPL15Q9P015 296 aaKnown RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 TRAV8-7A0A075B6U6 113 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 SERPINA3P01011 423 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 EVX1P49640 407 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 ZNF81P51508 661 aa11.17□□□□□ -0.62
CNOT4-204ENST00000414802 HNRNPA0Q13151 305 aaKnown RBP11.17□□□□□ -0.62
CNOT4-204ENST00000414802 BLMHQ13867 455 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms