RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CHEK1O14757 476 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 HOXC4P09017 264 aaPredicted RBP12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 DHODHQ02127 395 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF573Q86YE8 665 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 GALNT16Q8N428 558 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 NOXO1Q8NFA2 376 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 C2orf50Q96LR7 162 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 MEIKINA0A087WXM9 373 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF207O43670 478 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 PMCHP20382 165 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 TMEM268Q5VZI3 342 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 TCTEX1D1Q8N7M0 179 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 OR8B4Q96RC9 309 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 MED29Q9NX70 200 aa12.38□□□□□ -0.43
SMARCA4-202ENST00000413806 SH2D1BO14796 132 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 GRPP07492 148 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 HRH1P35367 487 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 RAB7AP51149 207 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 PKIAP61925 76 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 GLDNQ6ZMI3 551 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 PPP1R14DQ9NXH3 145 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 CISD3P0C7P0 127 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 EDN3P14138 238 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 GFERP55789 205 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 EDDM3BP56851 147 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 C19orf57Q0VDD7 668 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 GPNMBQ14956 572 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 C11orf87Q6NUJ2 197 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 HSD17B13Q7Z5P4 300 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 OR4C16Q8NGL9 310 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 NUDCD2Q8WVJ2 157 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 MMP24Q9Y5R2 645 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 HS3ST1O14792 307 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 THBS4P35443 961 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 CRYBB2P43320 205 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 PJVKQ0ZLH3 352 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF793Q6ZN11 406 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 EXTL1Q92935 676 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNF764Q96H86 408 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 MS4A10Q96PG2 267 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 RIMS4Q9H426 269 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 UBE2ZQ9H832 354 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 DUSP13Q9UII6 198 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 RNF150Q9ULK6 438 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 RAB27BO00194 218 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 DCTDP32321 178 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 ZNRF4Q8WWF5 429 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 C11orf40Q8WZ69 217 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 CMBLQ96DG6 245 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
SMARCA4-202ENST00000413806 CCDC187A0A096LP49 1063 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 PLPP2O43688 288 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 OR2J2O76002 312 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 IGHA2P01877 340 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 TTRP02766 147 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 FOXF1Q12946 379 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.436e-8■■■■■ 50.8
SMARCA4-202ENST00000413806 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 CXorf58Q96LI9 332 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 LRRC61Q9BV99 259 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 CTDSP1Q9GZU7 261 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 RBM38Q9H0Z9 239 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 TCF21O43680 179 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 CCKARP32238 428 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 NOVA1P51513 510 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 CCL11P51671 97 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 GPR32P1Q8NGA4 272 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 TMEM37Q8WXS4 190 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 FGF14Q92915 247 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 DLL4Q9NR61 685 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 IL17BQ9UHF5 180 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 LMO7DNF2Z398 122 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 SCAND1P57086 179 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 LANCL2Q9NS86 450 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 DHHO43323 396 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 LHX4Q969G2 390 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 C8orf44Q96CB5 159 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 NPAS1Q99742 590 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
SMARCA4-202ENST00000413806 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 METTL12A8MUP2 240 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
SMARCA4-202ENST00000413806 LRP3O75074 770 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms