RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 KCTD8Q6ZWB6 473 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 CDH24Q86UP0 819 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 SVOPQ8N4V2 548 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 OR10AD1Q8NGE0 317 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 DVL3Q92997 716 aaPredicted RBP13.56□□□□□ -0.24
HMGA1-204ENST00000401473 COMMD4Q9H0A8 199 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 DYNLRB1Q9NP97 96 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 MRPL15Q9P015 296 aaKnown RBP13.56□□□□□ -0.24
HMGA1-204ENST00000401473 HHLA2Q9UM44 414 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF281Q9Y2X9 895 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 H7C417 338 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 LY6HO94772 140 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ACHEP22303 614 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 PPOXP50336 477 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 CCL8P80075 99 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 RIPPLY1Q0D2K3 151 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 MLLT11Q13015 90 aaPredicted RBP13.55□□□□□ -0.24
HMGA1-204ENST00000401473 OR2Z1Q8NG97 314 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 OR13G1Q8NGZ3 307 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 PIGTQ969N2 578 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ADAT3Q96EY9 351 aaPredicted RBP13.55□□□□□ -0.24
HMGA1-204ENST00000401473 SORCS2Q96PQ0 1159 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ISYNA1Q9NPH2 558 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF275Q9NSD4 429 aaPredicted RBP13.55□□□□□ -0.24
HMGA1-204ENST00000401473 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 MED13LQ71F56 2210 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ITPR3Q14573 2671 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 A0A087WXM4 84 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 CD1AP06126 327 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 BMP4P12644 408 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 CPEP16870 476 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 RBMXP38159 391 aaKnown RBP13.55□□□□□ -0.24
HMGA1-204ENST00000401473 INSL4Q14641 139 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 NEDD8Q15843 81 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF367Q7RTV3 350 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 PHC2Q8IXK0 858 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 CSNK2A3Q8NEV1 391 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 PIGCQ92535 297 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 FGGYQ96C11 551 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 CYSLTR2Q9NS75 346 aa13.55□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF701Q9NV72 531 aaPredicted RBP13.55□□□□□ -0.24
HMGA1-204ENST00000401473 CGGBP1Q9UFW8 167 aaPredicted RBP13.55□□□□□ -0.24
HMGA1-204ENST00000401473 DYSFO75923 2080 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 DHRS7CA6NNS2 312 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF850A8MQ14 1090 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 GMDSO60547 372 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 CST4P01036 141 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 RPSAP08865 295 aaKnown RBP13.54□□□□□ -0.24
HMGA1-204ENST00000401473 SMIM18P0DKX4 95 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 HNRNPA0Q13151 305 aaKnown RBP13.54□□□□□ -0.24
HMGA1-204ENST00000401473 MAB21L1Q13394 359 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 GPR50Q13585 617 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 SSX1Q16384 188 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
HMGA1-204ENST00000401473 TMEM42Q69YG0 159 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 PAPOLGQ9BWT3 736 aaKnown RBP13.54□□□□□ -0.24
HMGA1-204ENST00000401473 CXorf56Q9H5V9 222 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
HMGA1-204ENST00000401473 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
HMGA1-204ENST00000401473 ZANQ9Y493 2812 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 IGHV3-64DA0A0J9YX35 117 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF816-ZNF321PA0A0X1KG74 233 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 LOC100289279A0A1B0GTE1 492 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ANKRD30BLA7E2S9 258 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 F5H5P2 479 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 NCR1O76036 304 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ADH4P08319 380 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 SOX2P48431 317 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 GP2P55259 537 aaKnown RBP13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 OR13C3Q8NGS6 347 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 GPR148Q8TDV2 347 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ORAI1Q96D31 301 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ELMOD3Q96FG2 381 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 FGF23Q9GZV9 251 aaPredicted RBP13.53□□□□□ -0.24
HMGA1-204ENST00000401473 HPXP02790 462 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 DNASE1P24855 282 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 PRDX4Q13162 271 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 UBE2V2Q15819 145 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 YIF1BQ5BJH7 314 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 CEP78Q5JTW2 689 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 SYT6Q5T7P8 510 aaPredicted RBP13.53□□□□□ -0.24
HMGA1-204ENST00000401473 UBASH3BQ8TF42 649 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 UFD1Q92890 307 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 NINJ1Q92982 152 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ITFG2Q969R8 447 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ITPKCQ96DU7 683 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 TMED9Q9BVK6 235 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 ENPP5Q9UJA9 477 aa13.53□□□□□ -0.24
HMGA1-204ENST00000401473 FBXO9Q9UK97 447 aaPredicted RBP13.53□□□□□ -0.24
HMGA1-204ENST00000401473 SVEP1Q4LDE5 3571 aa13.52□□□□□ -0.24
HMGA1-204ENST00000401473 TRBV5-5A0A0J9YX44 114 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 OCM2P0CE71 109 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF12P17014 697 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 PSMB9P28065 219 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms