RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZNF561Q8N587 486 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR52N4Q8NGI2 321 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR5M9Q8NGP3 310 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 ASB5Q8WWX0 329 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 SPTSSAQ969W0 71 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 FAM131CQ96AQ9 280 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 MRGPRX4Q96LA9 322 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 NMNAT2Q9BZQ4 307 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 ADAM19Q9H013 955 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR51M1Q9H341 326 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 UCK1Q9HA47 277 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 CA10Q9NS85 328 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 ZNF275Q9NSD4 429 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 OCIAD1Q9NX40 245 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 PUS1Q9Y606 427 aaKnown RBP eCLIP9.39□□□□□ -0.91
CALD1-203ENST00000393118 C7orf66A4D0T2 115 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 NDUFA2O43678 99 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR4E1P0C645 316 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 GDF1P27539 372 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 THEM4Q5T1C6 240 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 LCN10Q6JVE6 187 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 SLC25A24Q6NUK1 477 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 Q7L0L9 218 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR2W3Q7Z3T1 314 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 GLYATL2Q8WU03 294 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 RBM14Q96PK6 669 aaKnown RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 SMOC1Q9H4F8 434 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 FN3KRPQ9HA64 309 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 CRLF2Q9HC73 371 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 EHFQ9NZC4 300 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 SDCBPO00560 298 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 SCGNO76038 276 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 TCN2P20062 427 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 HRH1P35367 487 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 CASRP41180 1078 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 EIF1P41567 113 aaKnown RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 SPIN3Q5JUX0 258 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 GVQW1Q8N7I0 195 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR11G2Q8NGC1 345 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 CDC6Q99741 560 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 SOSTQ9BQB4 213 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 PCDHGA5Q9Y5G8 931 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 KIF26AQ9ULI4 1882 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 NHLRC3Q5JS37 347 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 OR1J2Q8NGS2 313 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 ESRP2Q9H6T0 727 aaKnown RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 MRPL22Q9NWU5 206 aaKnown RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 NOSIPQ9Y314 301 aaKnown RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 RALGAPA1Q6GYQ0 2036 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 A0A1W2PQD3 144 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 PPP1R2P9O14990 202 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 LMX1BO60663 402 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 TIAF1O95411 115 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 PMS2P2O95744 297 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 IFNA21P01568 189 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 MST1P26927 711 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 EPHA8P29322 1005 aaPredicted RBP9.38□□□□□ -0.91
CALD1-203ENST00000393118 MTCP1P56278 107 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 DMWDQ09019 674 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 MFAP5Q13361 173 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 LDLRAD3Q86YD5 345 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 ZNF383Q8NA42 475 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 PLPP5Q8NEB5 264 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 KCNG3Q8TAE7 436 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 HIST1H2AAQ96QV6 131 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 TIMP4Q99727 224 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 OR51B6Q9H340 312 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 ABI3Q9P2A4 366 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 ACAA1P09110 424 aaPredicted RBP9.38□□□□□ -0.91
CALD1-203ENST00000393118 GLP1RP43220 463 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 CLDN6P56747 220 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 TMEM255AQ5JRV8 349 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 UBAC2Q8NBM4 344 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 BORCS8Q96FH0 119 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 PCED1AQ9H1Q7 454 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 ZNF442Q9H7R0 627 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 CNTD2Q9H8S5 307 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 KCNJ16Q9NPI9 418 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 MEMO1Q9Y316 297 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 A0A087X0M5 115 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 A0A1B0GX30 115 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 HSPB2A8KAH6 182 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 CTDSPLO15194 276 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 RAG2P55895 527 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 HSPB2Q16082 182 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 IL22RA1Q8N6P7 574 aa9.38□□□□□ -0.91
CALD1-203ENST00000393118 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms