RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 BOD1Q96IK1 185 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
PTN-202ENST00000393083 DCHS2Q6V1P9 2916 aa11.72□□□□□ -0.53
PTN-202ENST00000393083 C5orf49A4QMS7 147 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 MEGF11A6BM72 1044 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 XRCC2O43543 280 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.53
PTN-202ENST00000393083 EIF4EP06730 217 aaKnown RBP11.71□□□□□ -0.53
PTN-202ENST00000393083 CCL2P13500 99 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 ELK1P19419 428 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 RAB3AP20336 220 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 BDKRB2P30411 391 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 THBS4P35443 961 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 CLDN12P56749 244 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 Q6ZSR3 168 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 LRRC28Q86X40 367 aaPredicted RBP11.71□□□□□ -0.53
PTN-202ENST00000393083 CCDC36Q8IYA8 594 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 OR5D14Q8NGL3 314 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 OR13C9Q8NGT0 318 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 SGK3Q96BR1 496 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 MRI1Q9BV20 369 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 C1QTNF5Q9BXJ0 243 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 LIN7BQ9HAP6 207 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 STEAP1Q9UHE8 339 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 SPATA2Q9UM82 520 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 FBN2P35556 2912 aa11.71□□□□□ -0.53
PTN-202ENST00000393083 A0A1W2PR80 420 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 FABP12A6NFH5 140 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 SIAH2O43255 324 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 CALCBP10092 127 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 AZGP1P25311 298 aaKnown RBP11.71□□□□□ -0.54
PTN-202ENST00000393083 CFPP27918 469 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 TAB1Q15750 504 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 RAB11BQ15907 218 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 TIMM23BQ5SRD1 257 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 SEZ6L2Q6UXD5 910 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 PGAP1Q75T13 922 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 ZC3HAV1LQ96H79 300 aaKnown RBP11.71□□□□□ -0.54
PTN-202ENST00000393083 POM121L2Q96KW2 1035 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 RGCCQ9H4X1 137 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 EXTL2Q9UBQ6 330 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 CGGBP1Q9UFW8 167 aaPredicted RBP11.71□□□□□ -0.54
PTN-202ENST00000393083 ZNF391Q9UJN7 358 aa11.71□□□□□ -0.54
PTN-202ENST00000393083 CENPEQ02224 2701 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SETXQ7Z333 2677 aaKnown RBP11.7□□□□□ -0.54
PTN-202ENST00000393083 LOC390937A0A1W2PQ73 354 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 OR5H1A6NKK0 313 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 A6NNC1 897 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 DEFB108AA8MXU0 73 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SLC17A2O00624 439 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SULT1B1O43704 296 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 CTAG2O75638 210 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SERPINA5P05154 406 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
PTN-202ENST00000393083 FAHP16930 419 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SSTR2P30874 369 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 EVX1P49640 407 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 P2RY14Q15391 338 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 ZNF79Q15937 498 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 UBE2NLQ5JXB2 153 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 PRR14LQ5THK1 2151 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 ZNF529Q6P280 563 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 COLCA1Q6ZS62 124 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SNX29P2Q8IUI4 249 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 JAGN1Q8N5M9 183 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 WDR31Q8NA23 367 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 SLC30A7Q8NEW0 376 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 OR4M1Q8NGD0 313 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 AKAP1Q92667 903 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTN-202ENST00000393083 ZNF75AQ96N20 296 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 NKX3-1Q99801 234 aaPredicted RBP11.7□□□□□ -0.54
PTN-202ENST00000393083 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 TMEM138Q9NPI0 162 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 ETV7Q9Y603 341 aa11.7□□□□□ -0.54
PTN-202ENST00000393083 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 DHRS7CA6NNS2 312 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 UPK1BO75841 260 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 APOA1P02647 267 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 ERCC1P07992 297 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 LOXP28300 417 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 TALDO1P37837 337 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 IDH3GP51553 393 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 ZNF92Q03936 586 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 TLE4Q04727 773 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 IL18Q14116 193 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 TBC1D28Q2M2D7 210 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 METAP1DQ6UB28 335 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 SEMA6DQ8NFY4 1073 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 OR6M1Q8NGM8 313 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 APOBEC3DQ96AK3 386 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 FOXRED1Q96CU9 486 aaPredicted RBP11.69□□□□□ -0.54
PTN-202ENST00000393083 C10orf35Q96D05 121 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 ABCB10Q9NRK6 738 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 CYSLTR2Q9NS75 346 aa11.69□□□□□ -0.54
PTN-202ENST00000393083 OR5V1Q9UGF6 321 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms