RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 OR3A2P47893 321 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 KRTCAP3Q53RY4 240 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 GLT8D1Q68CQ7 371 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 SFRP4Q6FHJ7 346 aaPredicted RBP9.09□□□□□ -0.95
COL6A3-205ENST00000392004 TPRA1Q86W33 373 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 RPRMLQ8N4K4 120 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 OR2T27Q8NH04 317 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 IL1F10Q8WWZ1 152 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 H1FXQ92522 213 aaKnown RBP9.09□□□□□ -0.95
COL6A3-205ENST00000392004 CCL17Q92583 94 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 PLPPR2Q96GM1 343 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 LPAR2Q9HBW0 351 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 GPN1Q9HCN4 374 aaPredicted RBP9.09□□□□□ -0.95
COL6A3-205ENST00000392004 TMEM138Q9NPI0 162 aa9.09□□□□□ -0.95
COL6A3-205ENST00000392004 SHISA3A0PJX4 238 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TP53P04637 393 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 SULT1A3P0DMM9 295 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 SULT1A4P0DMN0 295 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 FAHP16930 419 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TNFSF4P23510 183 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 OPRM1P35372 400 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TAS2R43P59537 309 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TRAM1Q15629 374 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ZNF239Q16600 458 aaKnown RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TMEM211Q6ICI0 200 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TAAR6Q96RI8 345 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ABHD1Q96SE0 405 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 DDOQ99489 341 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 IFT46Q9NQC8 304 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 RHBDD3Q9Y3P4 386 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 CLDN16Q9Y5I7 305 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 H3BUI4 141 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 PRAF2O60831 178 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 UBL3O95164 117 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 CFDP00746 253 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 GAAP10253 952 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 GALP22466 123 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ADH6P28332 368 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 EDDM3BP56851 147 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ZNF121P58317 390 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 AP3S2P59780 193 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 PSMA6P60900 246 aaKnown RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 CEBPEQ15744 281 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 LINC00052Q96N35 136 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 MYO15AQ9UKN7 3530 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 EPPINO95925 133 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 RAB3BP20337 219 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 RAB35Q15286 201 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 METTL11BQ5VVY1 283 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 BAIAP2L2Q6UXY1 529 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TMEM91Q6ZNR0 172 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 NLRC3Q7RTR2 1065 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 UBALD1Q8TB05 177 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ZNF837Q96EG3 531 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 MSL2Q9HCI7 577 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 AQP7P3A6NL99 342 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 FAM25EA8MYX2 175 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 PROB1E7EW31 1015 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 TRIM77I1YAP6 450 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ABCD4O14678 606 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 RAG2P55895 527 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 DGCR2P98153 550 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 EGR4Q05215 589 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 FOXF2Q12947 444 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ARSJQ5FYB0 599 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-205ENST00000392004 SPIN3Q5JUX0 258 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 OR10K2Q6IF99 312 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 BEND4Q6ZU67 534 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 SLC30A7Q8NEW0 376 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 OR2Z1Q8NG97 314 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 OR10AD1Q8NGE0 317 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 FBXW5Q969U6 566 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 OR10A4Q9H209 315 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 EVA1AQ9H8M9 152 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 PCDHB16Q9NRJ7 776 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 ZNF69Q9UC07 566 aa9.08□□□□□ -0.96
COL6A3-205ENST00000392004 SEMA7AO75326 666 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 RP2O75695 350 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 WISP1O95388 367 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 MAPK3P27361 379 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-205ENST00000392004 FBXW9Q5XUX1 488 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 PEG10Q86TG7 708 aaKnown RBP9.07□□□□□ -0.96
COL6A3-205ENST00000392004 C9orf106Q8NAJ2 232 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 TAS2R5Q9NYW4 299 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 CHST2Q9Y4C5 530 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 FLVCR1Q9Y5Y0 555 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 ANGPTL7O43827 346 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 THY1P04216 161 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 GAS1P54826 345 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 OR10A3P58181 314 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 ACSM1Q08AH1 577 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 TMEM244Q5VVB8 128 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 BHLHA15Q7RTS1 189 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-205ENST00000392004 SLC16A9Q7RTY1 509 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 ZNF227Q86WZ6 799 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 OR5D14Q8NGL3 314 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 NTMQ9P121 344 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 SPRR3Q9UBC9 169 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 HIF3AQ9Y2N7 669 aa9.07□□□□□ -0.96
COL6A3-205ENST00000392004 UBE2QL1A1L167 161 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms