RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 KCNS3Q9BQ31 491 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 MARVELD1Q9BSK0 173 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 NUP58Q9BVL2 599 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 ACTR3CQ9C0K3 210 aaPredicted RBP0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 ANKRA2Q9H9E1 313 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 MRM3Q9HC36 420 aaKnown RBP0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 DAZ1Q9NQZ3 744 aaKnown RBP0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 DYRK4Q9NR20 520 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 SLC39A1Q9NY26 324 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZNF257Q9Y2Q1 563 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 HES2Q9Y543 173 aa0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6-541P-201ENST00000384709 HELZ2Q9BYK8 2649 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 ATAD5Q96QE3 1844 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 BAZ1BQ9UIG0 1483 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 BRD4O60885 1362 aaPredicted RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 JCADQ9P266 1359 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 IGLV10-54A0A075B6I4 117 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 KCNE1BA0A087WTH5 132 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 IGKV1-6A0A0C4DH72 117 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 CLDN34H7C241 214 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 NME4O00746 187 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 LSM8O95777 96 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 IGKV1-39P01597 117 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 IGHG2P01859 326 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 IGKV1D-39P04432 117 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 CD28P10747 220 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 CD99P14209 185 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 TCP1P17987 556 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 NAB1Q13506 487 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 KRTAP21-3Q3LHN1 58 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 LINC00303Q3SY05 128 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 LRRC66Q68CR7 880 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 WDR82Q6UXN9 313 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 C12orf54Q6X4T0 127 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 TAS2R42Q7RTR8 314 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 HORMAD1Q86X24 394 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR5AR1Q8NGP9 310 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 DCAKDQ8WVC6 231 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 YIPF5Q969M3 257 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 S100PBPQ96BU1 408 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 ECHDC3Q96DC8 303 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 SGTBQ96EQ0 304 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 GPR21Q99679 349 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 SFXN3Q9BWM7 321 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 MS4A8Q9BY19 250 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 PIGUQ9H490 435 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 RETNQ9HD89 108 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 NLE1Q9NVX2 485 aaPredicted RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 TAS2R5Q9NYW4 299 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 FARSAQ9Y285 508 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 RCL1Q9Y2P8 373 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 SAMHD1Q9Y3Z3 626 aaKnown RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 RP1L1Q8IWN7 2480 aaPredicted RBP0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 NCKAP5O14513 1909 aa0.76□□□□□ -2.29
RNU6-541P-201ENST00000384709 SSH2Q76I76 1423 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 KBTBD11-OT1A0A1B0GTJ5 212 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 ISPDA4D126 451 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 SMCO2A6NFE2 343 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 ANKRD65E5RJM6 399 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 C15orf65H3BRN8 121 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 GABRPO00591 440 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 SLC9A3R1O14745 358 aaPredicted RBP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 EIF3HO15372 352 aaKnown RBP eCLIP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 SLC16A7O60669 478 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 CPSF4O95639 269 aaKnown RBP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 KRT14P02533 472 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 MAS1P04201 325 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 SLC35G6P0C7Q6 338 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 HSPD1P10809 573 aaKnown RBP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 BCKDHBP21953 392 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR12D2P58182 307 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR2B8PP59922 312 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZNF33AQ06730 810 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 MAJINQ3KP22 176 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 TMEM236Q5W0B7 351 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 SNX31Q8N9S9 440 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 TTC29Q8NA56 475 aaPredicted RBP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 LRRC75AQ8NAA5 344 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR56A4Q8NGH8 313 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 AKR7LQ8NHP1 331 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 NRGNQ92686 78 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 OR2V2Q96R30 315 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 CALN1Q9BXU9 219 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 FAM60AQ9NP50 221 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 RBFOX1Q9NWB1 397 aaKnown RBP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 LYARQ9NX58 379 aaKnown RBP0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 RWDD2AQ9UIY3 292 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 PITPNC1Q9UKF7 332 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 LAMB2P55268 1798 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 SHANK3Q9BYB0 1731 aa0.75□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZNF608Q9ULD9 1512 aaPredicted RBP0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 UBN2Q6ZU65 1347 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 SYNJ2BP-COX16A0A087WUM0 186 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 TSPAN11A1L157 253 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 GOLGA8OA6NCC3 632 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 D6RAR5 112 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 GOLGA8NF8WBI6 632 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 M0R1X1 148 aa0.74□□□□□ -2.29
RNU6-541P-201ENST00000384709 RNF13O43567 381 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms