RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 BANF2Q9H503 90 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
CHGB-201ENST00000378961 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 PISDQ9UG56 409 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 TRIOO75962 3097 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 LOC107986453A0A1B0GWG9 222 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 SLC35E2P0CK97 266 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 FCGR2CP31995 323 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 FASLGP48023 281 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 HLA-CQ95604 372 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 RBM18Q96H35 190 aaKnown RBP11.28□□□□□ -0.6
CHGB-201ENST00000378961 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 GAR1Q9NY12 217 aaKnown RBP11.28□□□□□ -0.6
CHGB-201ENST00000378961 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
CHGB-201ENST00000378961 A0A087X0M5 115 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 A0A1B0GX30 115 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 A0A1W2PR77 199 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 BTBD17A6NE02 478 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.6
CHGB-201ENST00000378961 SLC31A2O15432 143 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 NKX2-2O95096 273 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 OR6A2O95222 327 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 PAX6P26367 422 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 CAPZBP47756 277 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 GABRA4P48169 554 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 SLC25A1P53007 311 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 SCAND1P57086 179 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 TMEM33P57088 247 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 PRPS1P60891 318 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 SSX2Q16385 188 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 FGGYQ96C11 551 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 SSX3Q99909 188 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 MESP1Q9BRJ9 268 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 HS3ST3B1Q9Y662 390 aa11.27□□□□□ -0.6
CHGB-201ENST00000378961 TMEM265A0A087WTH1 108 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 TGIF2-C20orf24A0A0A6YYL0 155 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 TGFBR3LH3BV60 316 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.61
CHGB-201ENST00000378961 FABP4P15090 132 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 ZNF708P17019 499 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 G0S2P27469 103 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 SNCAP37840 140 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
CHGB-201ENST00000378961 CX3CR1P49238 355 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 KHDC3LQ587J8 217 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 ZNF529Q6P280 563 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 HOGA1Q86XE5 327 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 CADM4Q8NFZ8 388 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 TAAR8Q969N4 342 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 NTNG2Q96CW9 530 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 SHDQ96IW2 340 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 LRFN5Q96NI6 719 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 GNRHR2Q96P88 292 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 SLC26A1Q9H2B4 701 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 MMP25Q9NPA2 562 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 SLC17A5Q9NRA2 495 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 HDGFL3Q9Y3E1 203 aa11.27□□□□□ -0.61
CHGB-201ENST00000378961 SOCS1O15524 211 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 XRCC2O43543 280 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 RAD51DO75771 328 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 IFNA17P01571 189 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 PRH1P02810 166 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 CTLA4P16410 223 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 SERPINA2P20848 420 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 RPL12P30050 165 aaKnown RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 RBP2P50120 134 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 EGR3Q06889 387 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 ZNHIT3Q15649 155 aaPredicted RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 USF2Q15853 346 aaPredicted RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 PRTGQ2VWP7 1150 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 C14orf28Q4W4Y0 310 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 EEF1A1P5Q5VTE0 462 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 METTL27Q8N6F8 245 aaPredicted RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 HSD17B11Q8NBQ5 300 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 POC1AQ8NBT0 407 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 OR9K2Q8NGE7 335 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 SOX7Q9BT81 388 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 HIF3AQ9Y2N7 669 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 ASCC3Q8N3C0 2202 aaKnown RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 FOXS1O43638 330 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 TMEM127O75204 238 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 SFT2D2O95562 160 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 RENP00797 406 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 IGFBP3P17936 291 aaPredicted RBP11.26□□□□□ -0.61
CHGB-201ENST00000378961 DDTP30046 118 aa11.26□□□□□ -0.61
CHGB-201ENST00000378961 HNRNPKP61978 463 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHGB-201ENST00000378961 RAP1AP62834 184 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms