RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ARID1AO14497 2285 aa11.47□□□□□ -0.57
MSH5-204ENST00000375755 CLDN4O14493 209 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 CD37P11049 281 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 GLB1P16278 677 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 RAB5CP51148 216 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 CASP6P55212 293 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 ANGPTL5Q86XS5 388 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 ZNF615Q8N8J6 731 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 ZNF565Q8N9K5 539 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 AKR7LQ8NHP1 331 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 TMEM230Q96A57 120 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 ZNF524Q96C55 264 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 LMF2Q9BU23 707 aaKnown RBP11.46□□□□□ -0.57
MSH5-204ENST00000375755 RAB33BQ9H082 229 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 SPACA1Q9HBV2 294 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 TXNDC12O95881 172 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 IFNA6P05013 189 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
MSH5-204ENST00000375755 ITGA3P26006 1051 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 RPL18Q07020 188 aaKnown RBP11.46□□□□□ -0.57
MSH5-204ENST00000375755 HMGN3Q15651 99 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 ZNF141Q15928 474 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 ZNF239Q16600 458 aaKnown RBP11.46□□□□□ -0.57
MSH5-204ENST00000375755 LYSMD4Q5XG99 296 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
MSH5-204ENST00000375755 BCORP1Q8N888 145 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 HOXB13Q92826 284 aaPredicted RBP11.46□□□□□ -0.57
MSH5-204ENST00000375755 C14orf144Q96I85 54 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 OR8D2Q9GZM6 311 aa11.46□□□□□ -0.57
MSH5-204ENST00000375755 HSPB2A8KAH6 182 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 DUX1O43812 170 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 LMX1BO60663 402 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 TIAF1O95411 115 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 IFNA2P01563 188 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 HSPB2Q16082 182 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 TEX30Q5JUR7 227 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 TMEM268Q5VZI3 342 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 SLC38A9Q8NBW4 561 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 SLAMF9Q96A28 289 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 MEGF10Q96KG7 1140 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 SDHAF3Q9NRP4 125 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 UFSP2Q9NUQ7 469 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 AMDHD2Q9Y303 409 aa11.46□□□□□ -0.58
MSH5-204ENST00000375755 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 RENP00797 406 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 HLA-DQA2P01906 255 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 HOXB5P09067 269 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 FSTP19883 344 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 PI3P19957 117 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 HOXA5P20719 270 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 SULT1A1P50225 295 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 TMEM128Q5BJH2 165 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 CLEC18BQ6UXF7 455 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 ZNF679Q8IYX0 411 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 ARRDC1Q8N5I2 433 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 FAM46BQ96A09 425 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 TGIF2Q9GZN2 237 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 MMP25Q9NPA2 562 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 RHBDD3Q9Y3P4 386 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 U3KQA8 63 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 IGHV3-20A0A0C4DH32 117 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 ASAH2BP0C7U1 165 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 GNB3P16520 340 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 RAB6AP20340 208 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 TAS2R31P59538 309 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 ANKRD55Q3KP44 614 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 OR2A2Q6IF42 318 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 OR10H5Q8NGA6 315 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 DNAJA3Q96EY1 480 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 RBM14Q96PK6 669 aaKnown RBP11.45□□□□□ -0.58
MSH5-204ENST00000375755 SMOC1Q9H4F8 434 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 C5orf66Q9H5L9 145 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 RAB18Q9NP72 206 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 STARD10Q9Y365 291 aa11.45□□□□□ -0.58
MSH5-204ENST00000375755 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
MSH5-204ENST00000375755 SERINC4A6NH21 518 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 DNASE1L1P49184 302 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 NPY4RP50391 375 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 S100A10P60903 97 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 EIF5AP63241 154 aaKnown RBP11.44□□□□□ -0.58
MSH5-204ENST00000375755 FUT7Q11130 342 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 ZNHIT3Q15649 155 aaPredicted RBP11.44□□□□□ -0.58
MSH5-204ENST00000375755 LPAL2Q16609 132 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 KIF26BQ2KJY2 2108 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 C1orf100Q5SVJ3 147 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 FAM69BQ5VUD6 431 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 NSUN5P2Q63ZY6 315 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 LANCL3Q6ZV70 420 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 SSX9Q7RTT3 188 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 PLXDC1Q8IUK5 500 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 MAML2Q8IZL2 1156 aaPredicted RBP11.44□□□□□ -0.58
MSH5-204ENST00000375755 KDF1Q8NAX2 398 aaPredicted RBP11.44□□□□□ -0.58
MSH5-204ENST00000375755 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 RTN4RQ9BZR6 473 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 OPA3Q9H6K4 179 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 DNAJB11Q9UBS4 358 aa11.44□□□□□ -0.58
MSH5-204ENST00000375755 FLVCR1Q9Y5Y0 555 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms