RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SLC17A1Q14916 467 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 LAT2Q9GZY6 243 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 KLK11Q9UBX7 282 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 M0R135 149 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 GPR31O00270 319 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 NQO2P16083 231 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 HNF1AP20823 631 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CDONQ4KMG0 1287 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 GLDNQ6ZMI3 551 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SMRP1Q8NCR6 262 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF799Q96GE5 643 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CIB3Q96Q77 187 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SIGLEC11Q96RL6 698 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CDCP1Q9H5V8 836 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 TIMM10BQ9Y5J6 103 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 MTCH2Q9Y6C9 303 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 URB1O60287 2271 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 PDCD11Q14690 1871 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CBY3A6NI87 242 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 TBXA2RP21731 343 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 MPGP29372 298 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 MLF1P58340 268 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 DMWDQ09019 674 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC25A35Q3KQZ1 300 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SIGIRRQ6IA17 410 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 TMEM229BQ8NBD8 167 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SCCPDHQ8NBX0 429 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNRF4Q8WWF5 429 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CMBLQ96DG6 245 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SPEGQ15772 3267 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 PRSS37A4D1T9 235 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CSF2RBP32927 897 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 PIGPP57054 158 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 CDC20BQ86Y33 519 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 COMMD1Q8N668 190 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 LANCL2Q9NS86 450 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 SERTM1A2A2V5 107 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 PIAS2O75928 621 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 PNPP00491 289 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 SFTA3P0C7M3 94 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 RRASP10301 218 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 GFERP55789 205 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 TIAL1Q01085 375 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 C11orf87Q6NUJ2 197 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 OR52N5Q8NH56 324 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 WDR34Q96EX3 536 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC23A1Q9UHI7 598 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC22A13Q9Y226 551 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 A0A0A6YYD5 115 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CNIH1O95406 144 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 IAPPP10997 89 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 GPBAR1Q8TDU6 330 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 AKR1E2Q96JD6 320 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 DERL3Q96Q80 235 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 PSENENQ9NZ42 101 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 RNASEK-C17orf49H0YIS7 233 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 SH2D1BO14796 132 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 FZD2Q14332 565 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 TMEM178AQ8NBL3 297 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 NMES1Q9C002 83 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 PBOV1Q9GZY1 135 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CRLF2Q9HC73 371 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CYSLTR2Q9NS75 346 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 YTHDF2Q9Y5A9 579 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 TDRD15B5MCY1 1934 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 IDSB3KWA1 339 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 NRASP01111 189 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 TPPP2P59282 170 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 OR8G1Q15617 311 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 DTWD2Q8NBA8 298 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 TMEM104Q8NE00 496 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 OR2G2Q8NGZ5 317 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CHRDL1Q9BU40 450 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 IGHV1OR15-9A0A0B4J2B8 117 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 PPICP45877 212 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 GPR12P47775 334 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CYB561P49447 251 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 LGALS4P56470 323 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 HES1Q14469 280 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF528Q3MIS6 628 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 TMEM128Q5BJH2 165 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 C6orf15Q6UXA7 325 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF547Q8IVP9 402 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 MORN4Q8NDC4 146 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 OR5M1Q8NGP8 315 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CMTM3Q96MX0 182 aa11.07□□□□□ -0.64
NPLOC4-202ENST00000374747 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 PYCARD-AS1I3L0S3 204 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms