RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 IL5RAQ01344 420 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 STX3Q13277 289 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 KCNMB1Q16558 191 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 MICBQ29980 383 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 ATPAF1Q5TC12 328 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 DLEU7Q6UYE1 221 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 PGAP1Q75T13 922 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 FAM122BQ7Z309 247 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 GLB1L2Q8IW92 636 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR13C2Q8NGS9 318 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 FNDC8Q8TC99 324 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 TSSK2Q96PF2 358 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 SYT4Q9H2B2 425 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 RERGLQ9H628 205 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 RPS6KA6Q9UK32 745 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
HMGB1P39-201ENST00000366304 SH2D7A6NKC9 451 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 LCATP04180 440 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 IFI30P13284 250 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 COX7A1P24310 79 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 THBS3P49746 956 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 MXRA7P84157 204 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 DCTN2Q13561 401 aaKnown RBP6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 LRRC10Q5BKY1 277 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 GLYATL3Q5SZD4 288 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF788Q6ZQV5 615 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 PTCHD4Q6ZW05 846 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC36A1Q7Z2H8 476 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 LINC00346Q8IVM7 164 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 Q8NFD4 153 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR9Q1Q8NGQ5 310 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 BPIFA2Q96DR5 249 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 RBMXL1Q96E39 390 aaKnown RBP6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 PARD6BQ9BYG5 372 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 HDHD2Q9H0R4 259 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 PALMDQ9NP74 551 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 C19orf12Q9NSK7 152 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF391Q9UJN7 358 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 RAB21Q9UL25 225 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 MED31Q9Y3C7 131 aa6.76□□□□□ -1.33
HMGB1P39-201ENST00000366304 A0A1W2PQ09 198 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 H0YAE9 185 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 CDC42EP2O14613 210 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 UBDO15205 165 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 SNNO75324 88 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 PEX14O75381 377 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 RHBDL1O75783 438 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR5F1O95221 314 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 SNRNP70P08621 437 aaKnown RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 PSKH1P11801 424 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR1E2P47887 323 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC9A3P48764 834 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 TRAP1Q12931 704 aaKnown RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 ECH1Q13011 328 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 RABL3Q5HYI8 236 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC18B1Q6NT16 456 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 MRPL21Q7Z2W9 205 aaKnown RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 LNX2Q8N448 690 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 C11orf65Q8NCR3 313 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR1M1Q8NGA1 313 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR56B2PQ8NGI1 322 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 ANGPTL6Q8NI99 470 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 DPF1Q92782 380 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 PPP1R14BQ96C90 147 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 FGF23Q9GZV9 251 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 NUAK2Q9H093 628 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 MYLK2Q9H1R3 596 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 RNPEPL1Q9HAU8 725 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 HAO2Q9NYQ3 351 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 MRPL15Q9P015 296 aaKnown RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC25A10Q9UBX3 287 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 AURKCQ9UQB9 309 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 SH3GLB1Q9Y371 365 aa6.75□□□□□ -1.33
HMGB1P39-201ENST00000366304 KIAA1109Q2LD37 5005 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 IGLV1-36A0A0B4J1U3 117 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 CDIPTO14735 213 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 SIGLEC5O15389 551 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 KHDRBS3O75525 346 aaKnown RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 AMY1AP04745 511 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 AMY2AP04746 511 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 CD14P08571 375 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 NDUFB7P17568 137 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 PPIBP23284 216 aaKnown RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 CHATP28329 748 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 SDHAP31040 664 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 GGT2P36268 569 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 CDKN2AP42771 156 aaKnown RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 CEBPDP49716 269 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 GSK3BP49841 420 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 GZMMP51124 257 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 MTPNP58546 118 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 TAS2R41P59536 307 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 DYNC1I2Q13409 638 aaKnown RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 KHDC1LQ5JSQ8 128 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 TSEN54Q7Z6J9 526 aaKnown RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 NRMQ8IXM6 262 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 FAM185AQ8N0U4 392 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms