RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PPP1CAP62136 330 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 TPBGQ13641 420 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 LIN9Q5TKA1 542 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 ZNF420Q8TAQ5 688 aaPredicted RBP1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 RSPH1Q8WYR4 309 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 S100PBPQ96BU1 408 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 INIPQ9NRY2 104 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 RBFOX1Q9NWB1 397 aaKnown RBP1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 EXTL2Q9UBQ6 330 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 PLXNB1O43157 2135 aa1.33□□□□□ -2.2
RNU6-553P-201ENST00000364047 A0A0A6YYD5 115 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 IGKV1-6A0A0C4DH72 117 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 TRBV11-1A0A0K0K1C0 115 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 IZUMO1RA6ND01 250 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 C9JVG2 144 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 CPLX1O14810 134 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 RNF13O43567 381 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 HUS1O60921 280 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 IGKV1-39P01597 117 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 TRBV12-3P01733 135 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 IGKV1D-39P04432 117 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 THRAP10827 490 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 CBR1P16152 277 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 OR12D2P58182 307 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 IL5RAQ01344 420 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 C6orf99Q4VX62 202 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 PDZD11Q5EBL8 140 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 LDLRAD2Q5SZI1 272 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 TMPPEQ6ZT21 453 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 PAGE2Q7Z2X7 111 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 AKR7LQ8NHP1 331 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 YIPF5Q969M3 257 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 RPEQ96AT9 228 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 TEAD3Q99594 435 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 ZNF649Q9BS31 505 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 EMC6Q9BV81 110 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 MS4A8Q9BY19 250 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 VSIRQ9H7M9 311 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 ACP6Q9NPH0 428 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 CLN6Q9NWW5 311 aa1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.32□□□□□ -2.2
RNU6-553P-201ENST00000364047 LOC102724200A0A096LPH7 203 aaPredicted RBP1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 CCL15-CCL14A0A0B4J2E2 113 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 SYNGR2O43760 224 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 SLC16A7O60669 478 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 KCNK2O95069 426 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 FTH1P02794 183 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 IGKV1-16P04430 117 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 IFI30P13284 250 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 MRPL19P49406 292 aaKnown RBP1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 KDSRQ06136 332 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 FMODQ06828 376 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 CCL15Q16663 113 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 MAJINQ3KP22 176 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 KRTAP25-1Q3LHN0 102 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 SPESP1Q6UW49 350 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 FA2HQ7L5A8 372 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 TCF24Q7RTU0 167 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 TTC29Q8NA56 475 aaPredicted RBP1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 RBPMSQ93062 196 aaKnown RBP1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 XPO6Q96QU8 1125 aaKnown RBP1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 NUP58Q9BVL2 599 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 ZYG11BQ9C0D3 744 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 ANKRA2Q9H9E1 313 aa1.31□□□□□ -2.2
RNU6-553P-201ENST00000364047 CACNA1DQ01668 2161 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 COL5A3P25940 1745 aaPredicted RBP1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 ANKRD65E5RJM6 399 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 LRRC8AQ8IWT6 810 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 OR4D6Q8NGJ1 314 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 DYNLL2Q96FJ2 89 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 TPD52L3Q96J77 140 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 PRRC1Q96M27 445 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 C20orf24Q9BUV8 137 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 SFXN3Q9BWM7 321 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 OR2S2Q9NQN1 319 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 CA10Q9NS85 328 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 THADAQ6YHU6 1953 aa1.3□□□□□ -2.2
RNU6-553P-201ENST00000364047 ZNF73O43830 326 aaPredicted RBP1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 SLC19A2O60779 497 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 CCNB2O95067 398 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 CD160O95971 181 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 OR5AC1P0C628 307 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 GTF2E2P29084 291 aaKnown RBP1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 PRAMEF20Q5VT98 475 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 HHATQ5VTY9 493 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 TMEM236Q5W0B7 351 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 PDPNQ86YL7 162 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 SLC22A9Q8IVM8 553 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 OR5AR1Q8NGP9 310 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 OR8K3Q8NH51 312 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 STX18Q9P2W9 335 aaKnown RBP1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 UBN2Q6ZU65 1347 aa1.29□□□□□ -2.2
RNU6-553P-201ENST00000364047 TSPAN11A1L157 253 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 PSPHP1O15172 72 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 WBP4O75554 376 aaKnown RBP1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 LCA5LO95447 670 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 IGHMP01871 453 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 CLTAP09496 248 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 GABRG2P18507 467 aa1.28□□□□□ -2.2
RNU6-553P-201ENST00000364047 OTX1P32242 354 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms