RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ITFG2Q969R8 447 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 FOXRED1Q96CU9 486 aaPredicted RBP11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 DIRAS2Q96HU8 199 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 CDH20Q9HBT6 801 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 PALMDQ9NP74 551 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 TMEM138Q9NPI0 162 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 STEAP1Q9UHE8 339 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 SPATA2Q9UM82 520 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 APCP25054 2843 aa11.99□□□□□ -0.49
PDLIM5-203ENST00000359265 HIVEP3Q5T1R4 2406 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 RTTNQ86VV8 2226 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 A0A1B0GUH1 482 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 hCG_38984A0A1B0GV85 526 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 A0A1W2PR80 420 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 J3QRK9 145 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 CCL21O00585 134 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 SLC17A2O00624 439 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 SNRPBP14678 240 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 BMP5P22003 454 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 RANBP1P43487 201 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 SCAND1P57086 179 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 RIPPLY1Q0D2K3 151 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 RAB11BQ15907 218 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF529Q6P280 563 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 MTFR2Q6P444 385 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF474Q6S9Z5 364 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 OR51A2Q8NGJ7 313 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 OR6M1Q8NGM8 313 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 CMTM3Q96MX0 182 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 PIGLQ9Y2B2 252 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
PDLIM5-203ENST00000359265 POLEQ07864 2286 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 A6NIN4 97 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 A8MXE2 369 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 MAGEB3O15480 346 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 PAHP00439 452 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 CD37P11049 281 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 CCL2P13500 99 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 FAHP16930 419 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 TALDO1P37837 337 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 PPP5CP53041 499 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 ZNF92Q03936 586 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 OR8B8Q15620 311 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 UBE2NLQ5JXB2 153 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 TIMM23BQ5SRD1 257 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 ZBTB37Q5TC79 503 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 C16orf87Q6PH81 154 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 CNIH2Q6PI25 160 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 MYO7BQ6PIF6 2116 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 METAP1DQ6UB28 335 aaPredicted RBP11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 UTS2BQ765I0 119 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 MRPL21Q7Z2W9 205 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 JAGN1Q8N5M9 183 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 FAM169BQ8N8A8 192 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 STEAP2Q8NFT2 490 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 OR5L1Q8NGL2 311 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 OR5H6Q8NGV6 325 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 SORCS2Q96PQ0 1159 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 CHST5Q9GZS9 411 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 LIN7BQ9HAP6 207 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 NEK6Q9HC98 313 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 ELOVL5Q9NYP7 299 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 COQ3Q9NZJ6 369 aa11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 EIF3KQ9UBQ5 218 aaKnown RBP11.97□□□□□ -0.49
PDLIM5-203ENST00000359265 A0A0B4J203 849 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 ALX3O95076 343 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 IGKV3-15P01624 115 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 APOA1P02647 267 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 EIF4EP06730 217 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 HCKP08631 526 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 CELA3BP08861 270 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 ELK1P19419 428 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 PTBP1P26599 531 aaKnown RBP eCLIP11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 HTR2CP28335 458 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 WNT5AP41221 380 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 GSK3AP49840 483 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 CAPZA1P52907 286 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 FAM3AP98173 230 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 C1orf100Q5SVJ3 147 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 FAM131AQ6UXB0 335 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 CDH26Q8IXH8 852 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 OR5AS1Q8N127 324 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 RELL2Q8NC24 303 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 UQCC2Q9BRT2 126 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 METTL17Q9H7H0 456 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 PTTG3PQ9NZH4 202 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 EXTL2Q9UBQ6 330 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 CGGBP1Q9UFW8 167 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 SLC25A15Q9Y619 301 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 V9GYH0 126 aa11.96□□□□□ -0.49
PDLIM5-203ENST00000359265 FABP12A6NFH5 140 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 ICMTO60725 284 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 IGLV1-44P01699 117 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 ALDOBP05062 364 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms