RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PAPOLGQ9BWT3 736 aaKnown RBP9.9□□□□□ -0.82
SSU72-202ENST00000359060 SMIM3Q9BZL3 60 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 ARRDC1-AS1Q9H2J1 176 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 KLK13Q9UKR3 277 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
SSU72-202ENST00000359060 LHFPL6Q9Y693 200 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 A0A087WZY1 265 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 A0A096LPE4 126 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 A0A1W2PPZ6 126 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 CXCL2P19875 107 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 CBX5P45973 191 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 RSPO4Q2I0M5 234 aaPredicted RBP9.9□□□□□ -0.82
SSU72-202ENST00000359060 P4HA3Q7Z4N8 544 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 TMEM104Q8NE00 496 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 NFAM1Q8NET5 270 aaPredicted RBP9.9□□□□□ -0.82
SSU72-202ENST00000359060 PAQR8Q8TEZ7 354 aa9.9□□□□□ -0.82
SSU72-202ENST00000359060 ZNF845Q96IR2 970 aaPredicted RBP9.9□□□□□ -0.82
SSU72-202ENST00000359060 PCNX3Q9H6A9 2034 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 LOC102725191A0A1B0GVB3 256 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 HSPB6O14558 160 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 SPRY1O43609 319 aaPredicted RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 PET100P0DJ07 73 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 KLK2P20151 261 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 CEACAM16Q2WEN9 425 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 MRPL21Q7Z2W9 205 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 ZNF441Q8N8Z8 693 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 ZNF565Q8N9K5 539 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 PCDHB16Q9NRJ7 776 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 FBXO9Q9UK97 447 aaPredicted RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 AQP7P3A6NL99 342 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 TRAF3IP2O43734 574 aaPredicted RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 MPC2O95563 127 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 RPS27AP62979 156 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 UBA52P62987 128 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 PDCD1Q15116 288 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 AANATQ16613 207 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 ACTBL2Q562R1 376 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 BHLHE23Q8NDY6 225 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 TERB2Q8NHR7 220 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 TSNAXQ99598 290 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 PRR13Q9NZ81 148 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 K7ESF4 209 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 AGPAT2O15120 278 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 PGA4P0DJD7 388 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 PGA3P0DJD8 388 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 GABRA1P14867 456 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 HIST1H1DP16402 221 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 ATP1B3P54709 279 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 CLDN15P56746 228 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 EIF5AP63241 154 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 ZNF774Q6NX45 483 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 MEX3BQ6ZN04 569 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 FNDC9Q8TBE3 224 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 CSAG2Q9Y5P2 127 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 FSTP19883 344 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 PTGFRP43088 359 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 H2BFSP57053 126 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 ECH1Q13011 328 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 MALLQ13021 153 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 UTP23Q9BRU9 249 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 P4HTMQ9NXG6 502 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 MCTS1Q9ULC4 181 aaKnown RBP9.89□□□□□ -0.83
SSU72-202ENST00000359060 HS3ST3B1Q9Y662 390 aa9.89□□□□□ -0.83
SSU72-202ENST00000359060 PCP4L1A6NKN8 68 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 SLC33A1O00400 549 aaPredicted RBP9.88□□□□□ -0.83
SSU72-202ENST00000359060 CDC14BO60729 498 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 TSPAN9O75954 239 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 IGHEP01854 428 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 GSTP1P09211 210 aaKnown RBP9.88□□□□□ -0.83
SSU72-202ENST00000359060 RAB6AP20340 208 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 PCBD1P61457 104 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 FAM219AQ8IW50 185 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 C20orf196Q8IYI0 205 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 OR6S1Q8NH40 331 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 REEP6Q96HR9 211 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 PARPBPQ9NWS1 579 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 FAM206AQ9NX38 181 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 PILRBQ9UKJ0 227 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 A0A0J9YW62 118 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 RFPL4AA6NLU0 287 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 RFPL4AL1F8VTS6 287 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 RAB27BO00194 218 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 FBXO24O75426 580 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 AKR1C2P52895 323 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 RAC1P63000 192 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 AKR1C1Q04828 323 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 C2orf68Q2NKX9 166 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 ACER2Q5QJU3 275 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 LPCAT3Q6P1A2 487 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 BRICD5Q6PL45 260 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 DTWD2Q8NBA8 298 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 POC1BQ8TC44 478 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 KCNK7Q9Y2U2 307 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
SSU72-202ENST00000359060 EFNA2O43921 213 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 PRKACBP22694 351 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 ADH6P28332 368 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 PHLDA2Q53GA4 152 aa9.88□□□□□ -0.83
SSU72-202ENST00000359060 C6orf201Q7Z4U5 140 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms