RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FOXF1Q12946 379 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 OR8B12Q8NGG6 310 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 MICU1Q9BPX6 476 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 ACKR4Q9NPB9 350 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 SDHAF3Q9NRP4 125 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 EXPH5Q8NEV8 1989 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 IGLV3-32A0A0A0MS00 114 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 MSGN1A6NI15 193 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 HCKP08631 526 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 FOLR2P14207 255 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 ADH6P28332 368 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 OR3A4PP47883 348 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 ZNF84P51523 738 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 ARFRP1Q13795 201 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 SLC9A3R2Q15599 337 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 ANKRD55Q3KP44 614 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 AADACL3Q5VUY0 350 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 SMRP1Q8NCR6 262 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 ZC3H10Q96K80 434 aaKnown RBP15.64■□□□□ 0.09
RTN4-204ENST00000357732 PARP11Q9NR21 331 aa15.64■□□□□ 0.09
RTN4-204ENST00000357732 KCNAB3O43448 404 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 ADAP1O75689 374 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 CST4P01036 141 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 PRF1P14222 555 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 RPS2P15880 293 aaKnown RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 CTSSP25774 331 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 SULT1A2P50226 295 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 ZNF41P51814 821 aaPredicted RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 SRSF3P84103 164 aaKnown RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 ECH1Q13011 328 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 HMGN3Q15651 99 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 ZNF239Q16600 458 aaKnown RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 GFOD2Q3B7J2 385 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 TMPPEQ6ZT21 453 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 SYT13Q7L8C5 426 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 COMMD2Q86X83 199 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 OR13G1Q8NGZ3 307 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 OR6X1Q8NH79 312 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 OR5B2Q96R09 309 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 TAF9BQ9HBM6 251 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 GPR84Q9NQS5 396 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 C1orf123Q9NWV4 160 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 IGHV1OR15-9A0A0B4J2B8 117 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 FOXI3A8MTJ6 420 aaPredicted RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 DUX1O43812 170 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 CRTAPO75718 401 aaPredicted RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 NR2C1P13056 603 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 FBXW4P57775 412 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 ZNF121P58317 390 aaPredicted RBP15.63■□□□□ 0.09
RTN4-204ENST00000357732 RAB32Q13637 225 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 SLC25A47Q6Q0C1 308 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 CCDC54Q8NEL0 328 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 ARHGAP5-AS1Q96IT6 56 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 RNF122Q9H9V4 155 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 ATPIF1Q9UII2 106 aa15.63■□□□□ 0.09
RTN4-204ENST00000357732 PCDH15Q96QU1 1955 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 SPEGQ15772 3267 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 IGHV1OR21-1A0A087WYE8 117 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 RAD51DO75771 328 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 CD5P06127 495 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 ZNF17P17021 662 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 FKBP2P26885 142 aaKnown RBP15.62■□□□□ 0.09
RTN4-204ENST00000357732 NPBWR1P48145 328 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 F2RL1P55085 397 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 B2MP61769 119 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 LANCL3Q6ZV70 420 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 KDF1Q8NAX2 398 aaPredicted RBP15.62■□□□□ 0.09
RTN4-204ENST00000357732 APCDD1LQ8NCL9 501 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 OR10C1Q96KK4 312 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 GPER1Q99527 375 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 EMC6Q9BV81 110 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 SEC61A2Q9H9S3 476 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 COA4Q9NYJ1 87 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 C14orf166Q9Y224 244 aaKnown RBP15.62■□□□□ 0.09
RTN4-204ENST00000357732 ADAMTS9Q9P2N4 1935 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 JTBO76095 146 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 P2RY4P51582 365 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 PDZK1IP1Q13113 114 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 MYBPHQ13203 477 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 TM2D1Q9BX74 207 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 PCED1AQ9H1Q7 454 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 IFT22Q9H7X7 185 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 ASH2LQ9UBL3 628 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 VDAC3Q9Y277 283 aa15.62■□□□□ 0.09
RTN4-204ENST00000357732 CEP290O15078 2479 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 LAMA1P25391 3075 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 IGLV3-12A0A075B6K2 115 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 LOC102725191A0A1B0GVB3 256 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 RNASEK-C17orf49H0YIS7 233 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 RRP8O43159 456 aaKnown RBP15.61■□□□□ 0.09
RTN4-204ENST00000357732 ZNF354AO60765 605 aaPredicted RBP15.61■□□□□ 0.09
RTN4-204ENST00000357732 NAT2P11245 290 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 MUC1P15941 1255 aaPredicted RBP15.61■□□□□ 0.09
RTN4-204ENST00000357732 SNU13P55769 128 aaKnown RBP15.61■□□□□ 0.09
RTN4-204ENST00000357732 CSNK2A1P68400 391 aaPredicted RBP15.61■□□□□ 0.09
RTN4-204ENST00000357732 HIST3H3Q16695 136 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 C1orf189Q5VU69 101 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 SLC16A14Q7RTX9 510 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 TMEM200AQ86VY9 491 aa15.61■□□□□ 0.09
RTN4-204ENST00000357732 CSNK2A3Q8NEV1 391 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms